RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 FAM186BQ8IYM0 893 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 SMYD4Q8IYR2 804 aaPredicted RBP11.42□□□□□ -0.58
TMEM260-206ENST00000555046 THEM5Q8N1Q8 247 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 PARD3BQ8TEW8 1205 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 HASPINQ8TF76 798 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 HDAC7Q8WUI4 952 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 NELFBQ8WX92 580 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 CGRRF1Q99675 332 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 PCDHB8Q9UN66 801 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 AGAP1Q9UPQ3 857 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 TCHHQ07283 1943 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.41□□□□□ -0.58
TMEM260-206ENST00000555046 HIDE1A8MVS5 230 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 PPP1R3GB7ZBB8 358 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 PER2O15055 1255 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 CLASP2O75122 1294 aaKnown RBP11.41□□□□□ -0.58
TMEM260-206ENST00000555046 AKAP3O75969 853 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 OAZ2O95190 189 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 CSPG5O95196 566 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 ITGB3P05106 788 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 CNPP09543 421 aaKnown RBP11.41□□□□□ -0.58
TMEM260-206ENST00000555046 IL9P15248 144 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 ERCC5P28715 1186 aaPredicted RBP11.41□□□□□ -0.58
TMEM260-206ENST00000555046 ATICP31939 592 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 AARSP49588 968 aaKnown RBP eCLIP11.41□□□□□ -0.58
TMEM260-206ENST00000555046 NDUFV1P49821 464 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 YWHAHQ04917 246 aaPredicted RBP11.41□□□□□ -0.58
TMEM260-206ENST00000555046 CETN1Q12798 172 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 COL19A1Q14993 1142 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 PSMD5Q16401 504 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 CTC1Q2NKJ3 1217 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 ZCWPW2Q504Y3 356 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 CCDC183Q5T5S1 534 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 KLHL10Q6JEL2 608 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 DPH6Q7L8W6 267 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 TRAPPC11Q7Z392 1133 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 C1orf127Q8N9H9 656 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 CCDC150Q8NCX0 1101 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 ZSWIM2Q8NEG5 633 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 LNX1Q8TBB1 728 aaPredicted RBP11.41□□□□□ -0.58
TMEM260-206ENST00000555046 SPATA18Q8TC71 538 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 SENP8Q96LD8 212 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 KLHL5Q96PQ7 755 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 VN1R3Q9BXE9 311 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 PLEKHA4Q9H4M7 779 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 CLDND1Q9NY35 253 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 RWDD2AQ9UIY3 292 aa11.41□□□□□ -0.58
TMEM260-206ENST00000555046 OR6C75A6NL08 312 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 SPDYE4A6NLX3 237 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 CYB561D2O14569 222 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 TEX28O15482 410 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 HUS1O60921 280 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 GLUD1P00367 558 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 P4HA1P13674 534 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 POLR2BP30876 1174 aaKnown RBP11.4□□□□□ -0.58
TMEM260-206ENST00000555046 ELF1P32519 619 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 BRCC3P46736 316 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 NLRP12P59046 1061 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 MCCD1P59942 119 aaPredicted RBP11.4□□□□□ -0.58
TMEM260-206ENST00000555046 SMARCB1Q12824 385 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 BIRC3Q13489 604 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 MRPL58Q14197 206 aaKnown RBP11.4□□□□□ -0.58
TMEM260-206ENST00000555046 TPD52L1Q16890 204 aaPredicted RBP11.4□□□□□ -0.58
TMEM260-206ENST00000555046 SGSM1Q2NKQ1 1148 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 UVSSAQ2YD98 709 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 CTXN3Q4LDR2 81 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 ZNF280DQ6N043 979 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 CD300LGQ6UXG3 332 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 CYP26C1Q6V0L0 522 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 ASCL5Q7RTU5 278 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 FRMD5Q7Z6J6 570 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 EFCAB13Q8IY85 973 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 TMEM86AQ8N2M4 240 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 C3orf58Q8NDZ4 430 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 SPDYE1Q8NFV5 336 aaPredicted RBP11.4□□□□□ -0.58
TMEM260-206ENST00000555046 GPT2Q8TD30 523 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 TAF4BQ92750 862 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 HPDLQ96IR7 371 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 POP1Q99575 1024 aaKnown RBP11.4□□□□□ -0.58
TMEM260-206ENST00000555046 IMPG2Q9BZV3 1241 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 MTMR12Q9C0I1 747 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 DNAI2Q9GZS0 605 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 DZANK1Q9NVP4 752 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 GDAP2Q9NXN4 497 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 CACNG4Q9UBN1 327 aa11.4□□□□□ -0.58
TMEM260-206ENST00000555046 ARMCX3Q9UH62 379 aaPredicted RBP11.4□□□□□ -0.58
TMEM260-206ENST00000555046 MAST4O15021 2626 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 MYH11P35749 1972 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 F8W810 466 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 STAU1O95793 577 aaKnown RBP11.39□□□□□ -0.59
TMEM260-206ENST00000555046 CYP11A1P05108 521 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 CCDC192P0DO97 292 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 TRIM21P19474 475 aaKnown RBP11.39□□□□□ -0.59
TMEM260-206ENST00000555046 BMP6P22004 513 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 TKTP29401 623 aaKnown RBP11.39□□□□□ -0.59
TMEM260-206ENST00000555046 LHX1P48742 406 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 CASP4P49662 377 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 GUCY2FP51841 1108 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 ITIH3Q06033 890 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 BFSP1Q12934 665 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms