RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 NLRP4Q96MN2 994 aa22.57■■□□□ 1.2
ARHGEF40-204ENST00000555038 XYLT2Q9H1B5 865 aa22.57■■□□□ 1.2
ARHGEF40-204ENST00000555038 VTA1Q9NP79 307 aa22.57■■□□□ 1.2
ARHGEF40-204ENST00000555038 SLC12A6Q9UHW9 1150 aa22.57■■□□□ 1.2
ARHGEF40-204ENST00000555038 PTPN22Q9Y2R2 807 aa22.57■■□□□ 1.2
ARHGEF40-204ENST00000555038 COL1A2P08123 1366 aa22.57■■□□□ 1.2
ARHGEF40-204ENST00000555038 ZSWIM8A7E2V4 1837 aa22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 EBAG9O00559 213 aa22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 EPHX2P34913 555 aa22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 KCNJ1P48048 391 aa22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 TFAMQ00059 246 aaKnown RBP22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 ADCY2Q08462 1091 aa22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 WDR78Q5VTH9 848 aa22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 C9orf131Q5VYM1 1079 aa22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 BBOF1Q8ND07 529 aa22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 C3orf20Q8ND61 904 aa22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 C1orf54Q8WWF1 131 aa22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 FAM212AQ96EL1 285 aa22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 SNF8Q96H20 258 aa22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 OSBPL8Q9BZF1 889 aa22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 FHDC1Q9C0D6 1143 aaPredicted RBP22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 CDT1Q9H211 546 aa22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 RPF1Q9H9Y2 349 aaKnown RBP22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 STRIP2Q9ULQ0 834 aa22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 RRP15Q9Y3B9 282 aaKnown RBP22.56■■□□□ 1.2
ARHGEF40-204ENST00000555038 TCRBV5S1A1TA0A578 114 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 TULP2O00295 520 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 MCF2P10911 925 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 ASPAP45381 313 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 ARHGAP1Q07960 439 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 PTGISQ16647 500 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 TMEM132AQ24JP5 1023 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 ARMCX2Q7L311 632 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 RCOR2Q8IZ40 523 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 COPS5Q92905 334 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 EMID1Q96A84 441 aaPredicted RBP22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 STMN4Q9H169 189 aaPredicted RBP22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 NOVA2Q9UNW9 492 aaKnown RBP22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 SLC45A1Q9Y2W3 748 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 SRCAPQ6ZRS2 3230 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 RBM47A0AV96 593 aaKnown RBP22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 MED7O43513 233 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 GH1P01241 217 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 PAEPP09466 180 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 TAS2R40P59535 323 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 COPS2P61201 443 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 GUCY1A3Q02108 690 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 LMNB2Q03252 620 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 C2CD6Q53TS8 623 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 ODF2Q5BJF6 829 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 C6orf118Q5T5N4 469 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 LLGL2Q6P1M3 1020 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 DNAJC24Q6P3W2 148 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 PHLDB2Q86SQ0 1253 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 CCDC50Q8IVM0 306 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 THNSL1Q8IYQ7 743 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 RNF25Q96BH1 459 aaPredicted RBP22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 LHX5Q9H2C1 402 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 CHST7Q9NS84 486 aa22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 BCCIPQ9P287 314 aaKnown RBP eCLIP22.55■■□□□ 1.2
ARHGEF40-204ENST00000555038 NDUFAB1O14561 156 aa22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 RALAP11233 206 aa22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 CD58P19256 250 aa22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 POLR2BP30876 1174 aaKnown RBP22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 HPDP32754 393 aaPredicted RBP22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 PIGHQ14442 188 aaPredicted RBP22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 ZNF792Q3KQV3 632 aa22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 RHBDF2Q6PJF5 856 aa22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 B4GALNT4Q76KP1 1039 aa22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 ZNF467Q7Z7K2 595 aaPredicted RBP22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 LINC01465Q8N7H1 131 aa22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 NIPA2Q8N8Q9 360 aa22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 GPRC5AQ8NFJ5 357 aa22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 ROPN1BQ9BZX4 212 aaPredicted RBP22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 FAM124BQ9H5Z6 455 aaPredicted RBP22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 ROPN1Q9HAT0 212 aaPredicted RBP22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 ASIC3Q9UHC3 531 aa22.54■■□□□ 1.2
ARHGEF40-204ENST00000555038 RIPK2O43353 540 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 PTPN7P35236 360 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 CCT5P48643 541 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 CLCN3P51790 818 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 PPP1R15BQ5SWA1 713 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 TTC19Q6DKK2 380 aaPredicted RBP22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 CCHCR1Q8TD31 782 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 TRAPPC12Q8WVT3 735 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 BCO2Q9BYV7 579 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 ASB7Q9H672 318 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 PDGFCQ9NRA1 345 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 ANK1P16157 1881 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 MCM3APO60318 1980 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 ATXN2Q99700 1313 aaKnown RBP22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 LGALS2P05162 132 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 BRD2P25440 801 aaKnown RBP22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 ATICP31939 592 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 MAGOHP61326 146 aaKnown RBP22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 SLC29A2Q14542 456 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 EEF1DP3Q658K8 133 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 DRICH1Q6PGQ1 229 aaPredicted RBP22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 CEP128Q6ZU80 1094 aa22.53■■□□□ 1.2
ARHGEF40-204ENST00000555038 ERICH1Q86X53 443 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms