RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 SMC6Q96SB8 1091 aa17.55■□□□□ 0.4
XRCC3-209ENST00000554913 NTPCRQ9BSD7 190 aaKnown RBP17.55■□□□□ 0.4
XRCC3-209ENST00000554913 UBN1Q9NPG3 1134 aa17.55■□□□□ 0.4
XRCC3-209ENST00000554913 CBX6O95503 412 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 TNNI1P19237 187 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 BPIFB4P59827 614 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 RPL7AP62424 266 aaKnown RBP17.54■□□□□ 0.4
XRCC3-209ENST00000554913 NR1H3Q13133 447 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 PGM5Q15124 567 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 PDK4Q16654 411 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 BRDTQ58F21 947 aaPredicted RBP17.54■□□□□ 0.4
XRCC3-209ENST00000554913 TDRD10Q5VZ19 366 aaKnown RBP17.54■□□□□ 0.4
XRCC3-209ENST00000554913 POTEAQ6S8J7 498 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 TMEM270Q6UE05 265 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 MFSD7Q6UXD7 560 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 TAS1R3Q7RTX0 852 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 FAM151AQ8WW52 585 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 HAUS1Q96CS2 278 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 SLC7A6OSQ96CW6 309 aaPredicted RBP17.54■□□□□ 0.4
XRCC3-209ENST00000554913 CEP170P1Q96L14 293 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 FOXP3Q9BZS1 431 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 SLC24A3Q9HC58 644 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 ZNF70Q9UC06 446 aaPredicted RBP17.54■□□□□ 0.4
XRCC3-209ENST00000554913 ZMYND8Q9ULU4 1186 aaPredicted RBP17.54■□□□□ 0.4
XRCC3-209ENST00000554913 TNS1Q9HBL0 1735 aaKnown RBP17.54■□□□□ 0.4
XRCC3-209ENST00000554913 TESPA1A2RU30 521 aaPredicted RBP17.54■□□□□ 0.4
XRCC3-209ENST00000554913 EIF4E1BA6NMX2 242 aaKnown RBP17.54■□□□□ 0.4
XRCC3-209ENST00000554913 PEX11AO75192 247 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 BANF1O75531 89 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 ABL2P42684 1182 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 CCNG1P51959 295 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 JAK3P52333 1124 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 RPS6P62753 249 aaKnown RBP17.54■□□□□ 0.4
XRCC3-209ENST00000554913 PLEKHA7Q6IQ23 1121 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 TDRPQ86YL5 185 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 ZBED8Q8IZ13 594 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 ABRAQ8N0Z2 381 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 FAM13CQ8NE31 585 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 LRRC8CQ8TDW0 803 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 SPIRE2Q8WWL2 714 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 SPDL1Q96EA4 605 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 FAM167BQ9BTA0 163 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 PDGFDQ9GZP0 370 aaPredicted RBP17.54■□□□□ 0.4
XRCC3-209ENST00000554913 TMEM39BQ9GZU3 492 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 MRPL47Q9HD33 250 aaKnown RBP17.54■□□□□ 0.4
XRCC3-209ENST00000554913 PTPRJQ12913 1337 aa17.54■□□□□ 0.4
XRCC3-209ENST00000554913 ZNF862O60290 1169 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 ATP5HO75947 161 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 PIK3CAP42336 1068 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 DGKZQ13574 1117 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 TAF11Q15544 211 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 ZACNQ401N2 412 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 RGS9BPQ6ZS82 235 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 EP400NLQ6ZTU2 488 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 MCF2L2Q86YR7 1114 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 AGGF1Q8N302 714 aaeCLIP17.53■□□□□ 0.4
XRCC3-209ENST00000554913 C10orf82Q8WW14 230 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 ACSF2Q96CM8 615 aaPredicted RBP17.53■□□□□ 0.4
XRCC3-209ENST00000554913 TBC1D10AQ9BXI6 508 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 MAK16Q9BXY0 300 aaKnown RBP17.53■□□□□ 0.4
XRCC3-209ENST00000554913 APOBEC3GQ9HC16 384 aaKnown RBP17.53■□□□□ 0.4
XRCC3-209ENST00000554913 PCDHB4Q9Y5E5 795 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 CNTNAP1P78357 1384 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 PIAS1O75925 651 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 VNN1O95497 513 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 GNAZP19086 355 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 EPHB2P29323 1055 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 GNA15P30679 374 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 ACOT2P49753 483 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 NOP14P78316 857 aaKnown RBP17.53■□□□□ 0.4
XRCC3-209ENST00000554913 SAMD3Q8N6K7 520 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 MICAL1Q8TDZ2 1067 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 TTC25Q96NG3 672 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 SLITRK1Q96PX8 696 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 MOV10L1Q9BXT6 1211 aaKnown RBP17.53■□□□□ 0.4
XRCC3-209ENST00000554913 RNPEPL1Q9HAU8 725 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 TELO2Q9Y4R8 837 aa17.53■□□□□ 0.4
XRCC3-209ENST00000554913 CCDC189A1A4V9 331 aa17.52■□□□□ 0.4
XRCC3-209ENST00000554913 GOLGA8SH3BPF8 625 aa17.52■□□□□ 0.4
XRCC3-209ENST00000554913 GOLGA8MH3BSY2 632 aa17.52■□□□□ 0.4
XRCC3-209ENST00000554913 C4BPAP04003 597 aaKnown RBP17.52■□□□□ 0.4
XRCC3-209ENST00000554913 GARTP22102 1010 aa17.52■□□□□ 0.4
XRCC3-209ENST00000554913 ALDH3A1P30838 453 aa17.52■□□□□ 0.4
XRCC3-209ENST00000554913 LMNB2Q03252 620 aa17.52■□□□□ 0.4
XRCC3-209ENST00000554913 CCDC142Q17RM4 750 aa17.52■□□□□ 0.4
XRCC3-209ENST00000554913 CEP128Q6ZU80 1094 aa17.52■□□□□ 0.4
XRCC3-209ENST00000554913 OTOAQ7RTW8 1153 aa17.52■□□□□ 0.4
XRCC3-209ENST00000554913 LONP2Q86WA8 852 aa17.52■□□□□ 0.4
XRCC3-209ENST00000554913 LARGE2Q8N3Y3 721 aa17.52■□□□□ 0.4
XRCC3-209ENST00000554913 ALLCQ8N6M5 410 aa17.52■□□□□ 0.4
XRCC3-209ENST00000554913 FEZF2Q8TBJ5 459 aa17.52■□□□□ 0.4
XRCC3-209ENST00000554913 FNBP1Q96RU3 617 aa17.52■□□□□ 0.4
XRCC3-209ENST00000554913 GABBR1Q9UBS5 961 aa17.52■□□□□ 0.4
XRCC3-209ENST00000554913 SMG5Q9UPR3 1016 aaKnown RBP17.52■□□□□ 0.4
XRCC3-209ENST00000554913 SRCAPQ6ZRS2 3230 aa17.52■□□□□ 0.39
XRCC3-209ENST00000554913 TYROBPO43914 113 aa17.52■□□□□ 0.39
XRCC3-209ENST00000554913 DCTN3O75935 186 aa17.52■□□□□ 0.39
XRCC3-209ENST00000554913 SMNDC1O75940 238 aaKnown RBP eCLIP17.52■□□□□ 0.39
XRCC3-209ENST00000554913 KRT1P04264 644 aa17.52■□□□□ 0.39
XRCC3-209ENST00000554913 CALB2P22676 271 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms