RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ZNF711Q9Y462 761 aa16.52■□□□□ 0.24
SYNE3-203ENST00000554873 RASA4BC9J798 803 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 VILLO15195 856 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 RASA4O43374 803 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 GGPS1O95749 300 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 GAS8O95995 478 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 AMPD1P23109 780 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 GTF2H1P32780 548 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 PSMC2P35998 433 aaKnown RBP16.52■□□□□ 0.23
SYNE3-203ENST00000554873 NFIAQ12857 509 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 MED21Q13503 144 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 SLFN13Q68D06 897 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 RINT1Q6NUQ1 792 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 CCDC105Q8IYK2 499 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 FAM20AQ96MK3 541 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 GPR88Q9GZN0 384 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 PFDN4Q9NQP4 134 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 TAS2R14Q9NYV8 317 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 VAV3Q9UKW4 847 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 R3HDM2Q9Y2K5 976 aaKnown RBP16.52■□□□□ 0.23
SYNE3-203ENST00000554873 C10orf71Q711Q0 1435 aa16.52■□□□□ 0.23
SYNE3-203ENST00000554873 WDR46O15213 610 aaKnown RBP16.51■□□□□ 0.23
SYNE3-203ENST00000554873 ZNF862O60290 1169 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 CETPP11597 493 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 VPS41P49754 854 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 RAP1GDS1P52306 607 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 AP2B1P63010 937 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 GRAMD4Q6IC98 578 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 KSR1Q8IVT5 923 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 ALDH16A1Q8IZ83 802 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 PIP4K2CQ8TBX8 421 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 DENND1AQ8TEH3 1009 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 EIF2AK1Q9BQI3 630 aaKnown RBP16.51■□□□□ 0.23
SYNE3-203ENST00000554873 RABGAP1Q9Y3P9 1069 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 NUMBLQ9Y6R0 609 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 ZMYM2Q9UBW7 1377 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 PLSCR1O15162 318 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 TAL1P17542 331 aaPredicted RBP16.51■□□□□ 0.23
SYNE3-203ENST00000554873 COILP38432 576 aaPredicted RBP16.51■□□□□ 0.23
SYNE3-203ENST00000554873 FMO5P49326 533 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 CTTNQ14247 550 aaKnown RBP16.51■□□□□ 0.23
SYNE3-203ENST00000554873 COG2Q14746 738 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 TMEM63BQ5T3F8 832 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 OTOAQ7RTW8 1153 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 ZBED8Q8IZ13 594 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 ATP11CQ8NB49 1132 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 FNDC8Q8TC99 324 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 DNAJC18Q9H819 358 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 USP29Q9HBJ7 922 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 OLFML3Q9NRN5 406 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 TAS2R1Q9NYW7 299 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 WHRNQ9P202 907 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 CFAP69A5D8W1 941 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 THAP12O43422 761 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 HLA-DOAP06340 250 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 PYGMP11217 842 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 ASPHQ12797 758 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 CC2D2BQ6DHV5 1058 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 AADACL2Q6P093 401 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 C1orf228Q6PIY5 440 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 SLC30A10Q6XR72 485 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 PALB2Q86YC2 1186 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 MYCT1Q8N699 235 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 THAP2Q9H0W7 228 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 DDX18Q9NVP1 670 aaKnown RBP16.51■□□□□ 0.23
SYNE3-203ENST00000554873 COG5Q9UP83 839 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 PTPN22Q9Y2R2 807 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 STK24Q9Y6E0 443 aa16.51■□□□□ 0.23
SYNE3-203ENST00000554873 BOLA2-SMG1P6H3BVE0 249 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 CPA3P15088 417 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 PGM1P36871 562 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 SREBF1P36956 1147 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 SLC18A1P54219 525 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 ADRM1Q16186 407 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 CYP1B1Q16678 543 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 CBWD6Q4V339 395 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 CBWD3Q5JTY5 395 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 CBWD5Q5RIA9 395 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 RBM26Q5T8P6 1007 aaKnown RBP16.5■□□□□ 0.23
SYNE3-203ENST00000554873 RBM44Q6ZP01 1051 aaKnown RBP16.5■□□□□ 0.23
SYNE3-203ENST00000554873 TRIM67Q6ZTA4 783 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 NUP93Q8N1F7 819 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 DCAF4Q8WV16 495 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 CCDC17Q96LX7 622 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 PRICKLE1Q96MT3 831 aaPredicted RBP16.5■□□□□ 0.23
SYNE3-203ENST00000554873 CCDC77Q9BR77 488 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 AMNQ9BXJ7 453 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 NPHS2Q9NP85 383 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 HTR3EA5X5Y0 456 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 ZBTB39O15060 712 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 PRPF4O43172 522 aaKnown RBP eCLIP16.5■□□□□ 0.23
SYNE3-203ENST00000554873 SERPINB2P05120 415 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 CETN2P41208 172 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 SIAH1Q8IUQ4 282 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 OR6Y1Q8NGX8 325 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 ZNF180Q9UJW8 692 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 EFR3BQ9Y2G0 817 aa16.5■□□□□ 0.23
SYNE3-203ENST00000554873 BTAF1O14981 1849 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 GAP43P17677 238 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 TNFAIP3P21580 790 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms