RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 LPAR1Q92633 364 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 TRIM54Q9BYV2 358 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 SIK2Q9H0K1 926 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 PIM2Q9P1W9 311 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 NEXMIFQ5QGS0 1516 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 ZBTB22O15209 634 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 PJA2O43164 708 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 NPEPPSP55786 919 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 TROAPQ12815 778 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 LRRC34Q8IZ02 419 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 EME1Q96AY2 570 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 MMP19Q99542 508 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 MMTAG2Q9BU76 263 aaKnown RBP14.61□□□□□ -0.07
VTI1B-204ENST00000554659 MOV10L1Q9BXT6 1211 aaKnown RBP14.61□□□□□ -0.07
VTI1B-204ENST00000554659 CASS4Q9NQ75 786 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 AGAP1Q9UPQ3 857 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 FAM95CA0A1B0GW59 222 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 LRRIQ3A6PVS8 624 aaPredicted RBP14.61□□□□□ -0.07
VTI1B-204ENST00000554659 DMC1Q14565 340 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 NFIXQ14938 502 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 SCFD1Q8WVM8 642 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 INPP5DQ92835 1189 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 E2F7Q96AV8 911 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 ZNF668Q96K58 619 aaPredicted RBP14.61□□□□□ -0.07
VTI1B-204ENST00000554659 TMBIM4Q9HC24 238 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 ATMINO43313 823 aaPredicted RBP14.6□□□□□ -0.07
VTI1B-204ENST00000554659 MOCS2O96007 188 aaPredicted RBP14.6□□□□□ -0.07
VTI1B-204ENST00000554659 ENO3P13929 434 aaPredicted RBP14.6□□□□□ -0.07
VTI1B-204ENST00000554659 VHLP40337 213 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 ZNF235Q14590 738 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 TRIP10Q15642 601 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 APLFQ8IW19 511 aaPredicted RBP14.6□□□□□ -0.07
VTI1B-204ENST00000554659 FEZF2Q8TBJ5 459 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 SPATA18Q8TC71 538 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 MED15Q96RN5 788 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 TBC1D23Q9NUY8 699 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 CDY2AQ9Y6F7 541 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 CDY1Q9Y6F8 540 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 C16orf96A6NNT2 1141 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 NEMP1O14524 444 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 KRT16P08779 473 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 MYL2P10916 166 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 TMED10P49755 219 aaKnown RBP14.6□□□□□ -0.07
VTI1B-204ENST00000554659 RNF219Q5W0B1 726 aaPredicted RBP14.6□□□□□ -0.07
VTI1B-204ENST00000554659 OLFML2BQ68BL8 750 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 RRM2BQ7LG56 351 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 MDM1Q8TC05 714 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 GOLPH3Q9H4A6 298 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 PRR12Q9ULL5 1215 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 TMA16Q96EY4 203 aaKnown RBP14.6□□□□□ -0.07
VTI1B-204ENST00000554659 MAD2L2Q9UI95 211 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 ITM2BQ9Y287 266 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 A0A087X0T9 212 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 ASB14A6NK59 587 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 ENTPD3O75355 529 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 FAM228BP0C875 321 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 RFC5P40937 340 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 USP10Q14694 798 aaKnown RBP14.6□□□□□ -0.07
VTI1B-204ENST00000554659 FBXO33Q7Z6M2 555 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 ACTRT1Q8TDG2 376 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 PPP1R36Q96LQ0 422 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 PPP1R2P1Q96PQ5 205 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 CRAMP1Q96RY5 1269 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 THAP2Q9H0W7 228 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 CDYLQ9Y232 598 aa14.6□□□□□ -0.07
VTI1B-204ENST00000554659 PSTPIP1O43586 416 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 EXTL3O43909 919 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 OCM2P0CE71 109 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 OCMP0CE72 109 aaPredicted RBP14.59□□□□□ -0.07
VTI1B-204ENST00000554659 ACADSP16219 412 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 EMC2Q15006 297 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 SYCP2LQ5T4T6 812 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 HHIPL2Q6UWX4 724 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 PCYOX1LQ8NBM8 494 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 SH3TC2Q8TF17 1288 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 AFG1LQ8WV93 481 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 TMEM143Q96AN5 459 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 VPS33BQ9H267 617 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 CAPN6Q9Y6Q1 641 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 PTPRMP28827 1452 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 CST8O60676 142 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 SRP72O76094 671 aaKnown RBP14.59□□□□□ -0.07
VTI1B-204ENST00000554659 TKFCQ3LXA3 575 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 CDKAL1Q5VV42 579 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 URGCPQ8TCY9 931 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 AIPL1Q9NZN9 384 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 IGSF9BQ9UPX0 1349 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 IL18RAPO95256 599 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 RALAP11233 206 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 GRB10Q13322 594 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 ACAD10Q6JQN1 1059 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 PRPF39Q86UA1 669 aaKnown RBP14.59□□□□□ -0.07
VTI1B-204ENST00000554659 TTC30BQ8N4P2 665 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 ZNF555Q8NEP9 628 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 MXRA8Q9BRK3 442 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 FRMD8P1Q9BZ68 369 aaPredicted RBP14.59□□□□□ -0.07
VTI1B-204ENST00000554659 TASP1Q9H6P5 420 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 TRIM45Q9H8W5 580 aaPredicted RBP14.59□□□□□ -0.07
VTI1B-204ENST00000554659 TSR3Q9UJK0 312 aaKnown RBP14.59□□□□□ -0.07
VTI1B-204ENST00000554659 TSC22D4Q9Y3Q8 395 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms