RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 MFSD7Q6UXD7 560 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 TMEM130Q8N3G9 435 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 RBM15Q96T37 977 aaKnown RBP eCLIP16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 VPS33BQ9H267 617 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 DHX33Q9H6R0 707 aaKnown RBP16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 SAYSD1Q9NPB0 183 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 PARVAQ9NVD7 372 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 IVNS1ABPQ9Y6Y0 642 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 A0A0B4J269 797 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 ASAP2O43150 1006 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 RASSF9O75901 435 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 IFNB1P01574 187 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 MYL6P60660 151 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 MTM1Q13496 603 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 TNFAIP8L3Q5GJ75 292 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 SLFN12LQ6IEE8 588 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 CYB5D1Q6P9G0 228 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 CATSPERGQ6ZRH7 1159 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 PIGWQ7Z7B1 504 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 FUKQ8N0W3 1084 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 CCDC89Q8N998 374 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 C10orf88Q9H8K7 445 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 SCINQ9Y6U3 715 aa16.62■□□□□ 0.25
ARHGEF40-203ENST00000554514 TFAMQ00059 246 aaKnown RBP16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 PLCB4Q15147 1175 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 CCNG2Q16589 344 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 ZNF568Q3ZCX4 644 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 SYDE1Q6ZW31 735 aaPredicted RBP16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 KATNAL2Q8IYT4 538 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 LRRC71Q8N4P6 559 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 THOC1Q96FV9 657 aaKnown RBP16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 NAALADL1Q9UQQ1 740 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 MAFBQ9Y5Q3 323 aaPredicted RBP16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 CNTNAP2Q9UHC6 1331 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 POC1B-GALNT4F8VUJ3 575 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 GOLGA8SH3BPF8 625 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 GOLGA8MH3BSY2 632 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 UBA1P22314 1058 aaKnown RBP16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 ARL2P36404 184 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 ORC1Q13415 861 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 TMEM132AQ24JP5 1023 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 PLEKHA7Q6IQ23 1121 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 DNAJC24Q6P3W2 148 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 TRIM50Q86XT4 487 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 PRPF31Q8WWY3 499 aaKnown RBP16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 KDM4CQ9H3R0 1056 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 PHIPQ8WWQ0 1821 aa16.61■□□□□ 0.25
ARHGEF40-203ENST00000554514 SPAG7O75391 227 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 LDHAP00338 332 aaKnown RBP16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 STX2P32856 288 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 PTP4A2Q12974 167 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 FAM182AQ5T1J6 154 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 HIBCHQ6NVY1 386 aaPredicted RBP16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 TRIM72Q6ZMU5 477 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 TRPM8Q7Z2W7 1104 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 GINM1Q9NU53 330 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 SAE1Q9UBE0 346 aaPredicted RBP16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 STYXL1Q9Y6J8 313 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 LRRD1A4D1F6 860 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 TBXAS1P24557 533 aaPredicted RBP16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 ATP5DP30049 168 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 ARSEP51690 589 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 TGFB2P61812 414 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 OGDHQ02218 1023 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 GPS1Q13098 491 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 FASTKD3Q14CZ7 662 aaKnown RBP16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 SMTNL2Q2TAL5 461 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 CEP57Q86XR8 500 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 PHF13Q86YI8 300 aaPredicted RBP16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 EXD1Q8NHP7 514 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 ZBTB10Q96DT7 871 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 IP6K2Q9UHH9 426 aa16.6■□□□□ 0.25
ARHGEF40-203ENST00000554514 BANF1O75531 89 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 CETN2P41208 172 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 MAGEA4P43358 317 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 OAZ1P54368 228 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 GPAT2Q6NUI2 795 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 TBC1D1Q86TI0 1168 aaPredicted RBP16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 PARP9Q8IXQ6 854 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 THNSL1Q8IYQ7 743 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 PCYT2Q99447 389 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 NXF1Q9UBU9 619 aaKnown RBP16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 GJB1P08034 283 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 CAV1Q03135 178 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 C1QBPQ07021 282 aaKnown RBP16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 ZNF252P-AS1Q0IIN9 211 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 LY6KQ17RY6 165 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 LACTB2Q53H82 288 aaPredicted RBP16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 FAM47EQ6ZV65 393 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 NCAPG2Q86XI2 1143 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 TRPM4Q8TD43 1214 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 TCP11Q8WWU5 503 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 CNKSR2Q8WXI2 1034 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 SLITRK1Q96PX8 696 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 TGS1Q96RS0 853 aaKnown RBP16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 ZWILCHQ9H900 591 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 NEU2Q9Y3R4 380 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 RASA4BC9J798 803 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 RASA4O43374 803 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms