RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 EIF3JO75822 258 aaKnown RBP7.07□□□□□ -1.28
SCFD1-212ENST00000554486 STAM2O75886 525 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 SNAI1O95863 264 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-212ENST00000554486 BMP15O95972 392 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 ARP10275 920 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 CYP2B6P20813 491 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 MARCKSP29966 332 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-212ENST00000554486 RGS2P41220 211 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 HK2P52789 917 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 GRIN1Q05586 938 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 STK38Q15208 465 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 STXBP2Q15833 593 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 IL17AQ16552 155 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 TIGD5Q53EQ6 642 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 FYB2Q5VWT5 728 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 OLFML2BQ68BL8 750 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 MAMDC4Q6UXC1 1216 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 ARMCX2Q7L311 632 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 PLA2G4DQ86XP0 818 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 SCUBE1Q8IWY4 988 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 OXR1Q8N573 874 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 ABHD4Q8TB40 342 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 ETNPPLQ8TBG4 499 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 MYLIPQ8WY64 445 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 GJA10Q969M2 543 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 FAM84AQ96KN4 292 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 UIMC1Q96RL1 719 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 NAP1L4Q99733 375 aaKnown RBP7.07□□□□□ -1.28
SCFD1-212ENST00000554486 DHRS4Q9BTZ2 278 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 WDR11Q9BZH6 1224 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 KATNBL1Q9H079 304 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 KCNMB3Q9NPA1 279 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 SLC5A4Q9NY91 659 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 SRRDQ9UH36 339 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 MRPS23Q9Y3D9 190 aaKnown RBP7.07□□□□□ -1.28
SCFD1-212ENST00000554486 WDR81Q562E7 1941 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 TRBV23-1A0A0A0MS06 115 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 ZNF503-AS2A6NEH8 195 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 B4DLN1 442 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 TBX3O15119 743 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 SPTLC2O15270 562 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 FOXN1O15353 648 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 ATP9AO75110 1047 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 CPP00450 1065 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 C8AP07357 584 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 OR52Z1P0C646 297 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 HSPA8P11142 646 aaKnown RBP7.06□□□□□ -1.28
SCFD1-212ENST00000554486 ICAM3P32942 547 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 PRPHP41219 470 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 KCNJ6P48051 423 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 SEPHS1P49903 392 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 SETQ01105 290 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-212ENST00000554486 ITGB3BPQ13352 177 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-212ENST00000554486 KIR3DS1Q14943 382 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 CALCRLQ16602 461 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 MLANAQ16655 118 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 ARL6IP4Q66PJ3 421 aaKnown RBP7.06□□□□□ -1.28
SCFD1-212ENST00000554486 TAPT1Q6NXT6 567 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 OTOP1Q7RTM1 612 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 SLCO6A1Q86UG4 719 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 SPPL2CQ8IUH8 684 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 FBXO16Q8IX29 292 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-212ENST00000554486 MSL3Q8N5Y2 521 aaKnown RBP7.06□□□□□ -1.28
SCFD1-212ENST00000554486 PDZD8Q8NEN9 1154 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 KCNG4Q8TDN1 519 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 TRIB2Q92519 343 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 SLC5A5Q92911 643 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 GBP4Q96PP9 640 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 JMJD8Q96S16 334 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 SCAND2PQ9GZW5 306 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-212ENST00000554486 BCAS3Q9H6U6 928 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 AGO4Q9HCK5 861 aaKnown RBP7.06□□□□□ -1.28
SCFD1-212ENST00000554486 PDGFCQ9NRA1 345 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 KCNH7Q9NS40 1196 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 FBXO2Q9UK22 296 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-212ENST00000554486 PCDHA7Q9UN72 937 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 NPFFR2Q9Y5X5 522 aa7.06□□□□□ -1.28
SCFD1-212ENST00000554486 ELP1O95163 1332 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 LAD1O00515 517 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 PPP6R2O75170 966 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 PSMD10O75832 226 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 ARIH2O95376 493 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 HPXP02790 462 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 HSPA1AP0DMV8 641 aaKnown RBP7.05□□□□□ -1.28
SCFD1-212ENST00000554486 HSPA1BP0DMV9 641 aaKnown RBP7.05□□□□□ -1.28
SCFD1-212ENST00000554486 LCP1P13796 627 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 KCNA2P16389 499 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 HOXD10P28358 340 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 CYP2C19P33261 490 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 KIR2DL1P43626 348 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-212ENST00000554486 KIR2DL2P43627 348 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-212ENST00000554486 SP2Q02086 613 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 SPIRE1Q08AE8 756 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 DUSP4Q13115 394 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 MTMR1Q13613 665 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 PRAMEF19Q5SWL8 479 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 TMEM63BQ5T3F8 832 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 ACBD5Q5T8D3 534 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-212ENST00000554486 CCDC62Q6P9F0 684 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 B3GNT9Q6UX72 402 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms