RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 A6NNZ2 444 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 E9PLN8 166 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 CDKL5O76039 1030 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 CHEK2O96017 543 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 TACR2P21452 398 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 GUCY1B3Q02153 619 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 PIGFQ07326 219 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 HABP2Q14520 560 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-211ENST00000554437 HSP90AB2PQ58FF8 381 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 CRB2Q5IJ48 1285 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 LY6G5CQ5SRR4 150 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 ARMC6Q6NXE6 501 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 CCDC149Q6ZUS6 474 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 RHOUQ7L0Q8 258 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 MRGPREQ86SM8 312 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 USP37Q86T82 979 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 COL23A1Q86Y22 540 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-211ENST00000554437 KIAA0319LQ8IZA0 1049 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 CCDC136Q96JN2 1154 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 SMOQ99835 787 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 VKORC1Q9BQB6 163 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 SIK2Q9H0K1 926 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 ZMAT3Q9HA38 289 aaKnown RBP6.36□□□□□ -1.39
SCFD1-211ENST00000554437 PIH1D1Q9NWS0 290 aaKnown RBP6.36□□□□□ -1.39
SCFD1-211ENST00000554437 ANKFY1Q9P2R3 1169 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 AGAP1Q9UPQ3 857 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 POLRMTO00411 1230 aaKnown RBP6.35□□□□□ -1.39
SCFD1-211ENST00000554437 MCM7P33993 719 aa6.35□□□□□ -1.39
SCFD1-211ENST00000554437 ZXDAP98168 799 aa6.35□□□□□ -1.39
SCFD1-211ENST00000554437 CNN3Q15417 329 aaKnown RBP6.35□□□□□ -1.39
SCFD1-211ENST00000554437 EMC10Q5UCC4 262 aa6.35□□□□□ -1.39
SCFD1-211ENST00000554437 MAEAQ7L5Y9 396 aa6.35□□□□□ -1.39
SCFD1-211ENST00000554437 SRGAP1Q7Z6B7 1085 aa6.35□□□□□ -1.39
SCFD1-211ENST00000554437 DGKHQ86XP1 1220 aa6.35□□□□□ -1.39
SCFD1-211ENST00000554437 DDX17Q92841 729 aaKnown RBP6.35□□□□□ -1.39
SCFD1-211ENST00000554437 BOD1Q96IK1 185 aa6.35□□□□□ -1.39
SCFD1-211ENST00000554437 ADAM2Q99965 735 aa6.35□□□□□ -1.39
SCFD1-211ENST00000554437 CNPPD1Q9BV87 410 aa6.35□□□□□ -1.39
SCFD1-211ENST00000554437 MLST8Q9BVC4 326 aa6.35□□□□□ -1.39
SCFD1-211ENST00000554437 TINAGL1Q9GZM7 467 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-211ENST00000554437 GALNT9Q9HCQ5 603 aa6.35□□□□□ -1.39
SCFD1-211ENST00000554437 VSX1Q9NZR4 365 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-211ENST00000554437 L1RE1Q9UN81 338 aa6.35□□□□□ -1.39
SCFD1-211ENST00000554437 HS3ST3A1Q9Y663 406 aa6.35□□□□□ -1.39
SCFD1-211ENST00000554437 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.35□□□□□ -1.39
SCFD1-211ENST00000554437 CCDC195A0A1B0GUA6 201 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 CFAP69A5D8W1 941 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 M0QYG6 137 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 KIF3BO15066 747 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 PHGDHO43175 533 aaKnown RBP6.34□□□□□ -1.39
SCFD1-211ENST00000554437 FZD7O75084 574 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 SPDEFO95238 335 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 FOSP01100 380 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-211ENST00000554437 ADH4P08319 380 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 KITP10721 976 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 KCNA2P16389 499 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 USP14P54578 494 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 POU6F2P78424 691 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-211ENST00000554437 ABHD18Q0P651 414 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 TP53BP2Q13625 1128 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 PTPAQ15257 358 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 CYP2A13Q16696 494 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 TAPT1Q6NXT6 567 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 SLC30A10Q6XR72 485 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 CHST15Q7LFX5 561 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-211ENST00000554437 ARHGEF19Q8IW93 802 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 Q8N1X5 172 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 FAM156AQ8NDB6 213 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 NACC2Q96BF6 587 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 TIFAQ96CG3 184 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 MRGPRX1Q96LB2 322 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 TRIB1Q96RU8 372 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 DKK2Q9UBU2 259 aa6.34□□□□□ -1.39
SCFD1-211ENST00000554437 TOR1BO14657 336 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 TPP1O14773 563 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 VPS4BO75351 444 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 KIF20AO95235 890 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 ZBED1O96006 694 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 CACNB3P54284 484 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 FPGSQ05932 587 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 GEN1Q17RS7 908 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 KIAA0753Q2KHM9 967 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 RNF220Q5VTB9 566 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 SWSAP1Q6NVH7 229 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 USP51Q70EK9 711 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 CLNKQ7Z7G1 428 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 Q8NA96 180 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 LRIG1Q96JA1 1093 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 P2RX7Q99572 595 aaKnown RBP6.33□□□□□ -1.4
SCFD1-211ENST00000554437 ATP6V0A4Q9HBG4 840 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 TMEM74BQ9NUR3 256 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 MRPS18AQ9NVS2 196 aaKnown RBP6.33□□□□□ -1.4
SCFD1-211ENST00000554437 CTTNBP2NLQ9P2B4 639 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 NEU2Q9Y3R4 380 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 HS3ST4Q9Y661 456 aa6.33□□□□□ -1.4
SCFD1-211ENST00000554437 PRAMEF33A0A0G2JMD5 474 aa6.32□□□□□ -1.4
SCFD1-211ENST00000554437 MYADML2A6NDP7 307 aa6.32□□□□□ -1.4
SCFD1-211ENST00000554437 PRAMEF10O60809 474 aa6.32□□□□□ -1.4
SCFD1-211ENST00000554437 ZFPL1O95159 310 aa6.32□□□□□ -1.4
SCFD1-211ENST00000554437 UNC5CO95185 931 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms