RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 KCNJ14Q9UNX9 436 aa18.54■□□□□ 0.56
NEK9-204ENST00000554258 TNRC6BQ9UPQ9 1833 aaKnown RBP18.53■□□□□ 0.56
NEK9-204ENST00000554258 PTGESO14684 152 aa18.53■□□□□ 0.56
NEK9-204ENST00000554258 ARHGAP6O43182 974 aa18.53■□□□□ 0.56
NEK9-204ENST00000554258 B3GAT3O94766 335 aa18.53■□□□□ 0.56
NEK9-204ENST00000554258 ATXN3P54252 364 aaPredicted RBP18.53■□□□□ 0.56
NEK9-204ENST00000554258 NLRP5P59047 1200 aa18.53■□□□□ 0.56
NEK9-204ENST00000554258 PTENP60484 403 aa18.53■□□□□ 0.56
NEK9-204ENST00000554258 PLCB2Q00722 1185 aa18.53■□□□□ 0.56
NEK9-204ENST00000554258 HNRNPDQ14103 355 aaKnown RBP18.53■□□□□ 0.56
NEK9-204ENST00000554258 ZNF843Q8N446 348 aa18.53■□□□□ 0.56
NEK9-204ENST00000554258 ZNF579Q8NAF0 562 aaKnown RBP18.53■□□□□ 0.56
NEK9-204ENST00000554258 BICD2Q8TD16 824 aa18.53■□□□□ 0.56
NEK9-204ENST00000554258 ADAMTS14Q8WXS8 1223 aa18.53■□□□□ 0.56
NEK9-204ENST00000554258 CEP170P1Q96L14 293 aa18.53■□□□□ 0.56
NEK9-204ENST00000554258 LRRC3BQ96PB8 259 aa18.53■□□□□ 0.56
NEK9-204ENST00000554258 FOXD4L1Q9NU39 408 aa18.53■□□□□ 0.56
NEK9-204ENST00000554258 ARID2Q68CP9 1835 aa18.53■□□□□ 0.56
NEK9-204ENST00000554258 TRIP11Q15643 1979 aa18.52■□□□□ 0.56
NEK9-204ENST00000554258 PDCP20941 246 aa18.52■□□□□ 0.56
NEK9-204ENST00000554258 RFC5P40937 340 aa18.52■□□□□ 0.56
NEK9-204ENST00000554258 PSMC5P62195 406 aa18.52■□□□□ 0.56
NEK9-204ENST00000554258 TWF1Q12792 350 aa18.52■□□□□ 0.56
NEK9-204ENST00000554258 SYT13Q7L8C5 426 aa18.52■□□□□ 0.56
NEK9-204ENST00000554258 BLIDQ8IZY5 108 aa18.52■□□□□ 0.56
NEK9-204ENST00000554258 TPSD1Q9BZJ3 242 aa18.52■□□□□ 0.56
NEK9-204ENST00000554258 A0A1W2PRU2 124 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 I3L4J1 428 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 B4GALT5O43286 388 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 TRAPPC3O43617 180 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 PSMD10O75832 226 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 EGFP01133 1207 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 HSP90AA1P07900 732 aaKnown RBP18.51■□□□□ 0.55
NEK9-204ENST00000554258 PDIA4P13667 645 aaKnown RBP18.51■□□□□ 0.55
NEK9-204ENST00000554258 BCKDHBP21953 392 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 MBTD1Q05BQ5 628 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 TRIM29Q14134 588 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 DMC1Q14565 340 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 EMC2Q15006 297 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 AMHR2Q16671 573 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 RPLP0P6Q8NHW5 317 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 TNFRSF25Q93038 417 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 MBD1Q9UIS9 605 aaPredicted RBP18.51■□□□□ 0.55
NEK9-204ENST00000554258 MYO16Q9Y6X6 1858 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 COL6A6A6NMZ7 2263 aa18.51■□□□□ 0.55
NEK9-204ENST00000554258 PTPRQQ9UMZ3 2332 aa18.5■□□□□ 0.55
NEK9-204ENST00000554258 TMEM189-UBE2V1I3L0A0 370 aa18.5■□□□□ 0.55
NEK9-204ENST00000554258 SYT1P21579 422 aa18.5■□□□□ 0.55
NEK9-204ENST00000554258 IGFBP6P24592 240 aaPredicted RBP18.5■□□□□ 0.55
NEK9-204ENST00000554258 CACNB1Q02641 598 aaPredicted RBP18.5■□□□□ 0.55
NEK9-204ENST00000554258 TFDP1Q14186 410 aa18.5■□□□□ 0.55
NEK9-204ENST00000554258 NAB2Q15742 525 aa18.5■□□□□ 0.55
NEK9-204ENST00000554258 MAPK6Q16659 721 aa18.5■□□□□ 0.55
NEK9-204ENST00000554258 STXBP5Q5T5C0 1151 aa18.5■□□□□ 0.55
NEK9-204ENST00000554258 PNPLA1Q8N8W4 532 aa18.5■□□□□ 0.55
NEK9-204ENST00000554258 GTPBP2Q9BX10 602 aaKnown RBP18.5■□□□□ 0.55
NEK9-204ENST00000554258 DKK4Q9UBT3 224 aa18.5■□□□□ 0.55
NEK9-204ENST00000554258 PPME1Q9Y570 386 aa18.5■□□□□ 0.55
NEK9-204ENST00000554258 KIAA1549LQ6ZVL6 1849 aa18.5■□□□□ 0.55
NEK9-204ENST00000554258 A0A087WV48 116 aa18.49■□□□□ 0.55
NEK9-204ENST00000554258 TRDMT1O14717 391 aaKnown RBP18.49■□□□□ 0.55
NEK9-204ENST00000554258 OPHN1O60890 802 aa18.49■□□□□ 0.55
NEK9-204ENST00000554258 FTH1P19P0C7X4 201 aa18.49■□□□□ 0.55
NEK9-204ENST00000554258 U2AF2P26368 475 aaKnown RBP eCLIP18.49■□□□□ 0.55
NEK9-204ENST00000554258 DDIT3P35638 169 aa18.49■□□□□ 0.55
NEK9-204ENST00000554258 GUCY1B3Q02153 619 aa18.49■□□□□ 0.55
NEK9-204ENST00000554258 MXD4Q14582 209 aaPredicted RBP18.49■□□□□ 0.55
NEK9-204ENST00000554258 TRIP6Q15654 476 aaKnown RBP18.49■□□□□ 0.55
NEK9-204ENST00000554258 TPGS2Q68CL5 300 aa18.49■□□□□ 0.55
NEK9-204ENST00000554258 SYT12Q8IV01 421 aa18.49■□□□□ 0.55
NEK9-204ENST00000554258 DIS3L2Q8IYB7 885 aaKnown RBP18.49■□□□□ 0.55
NEK9-204ENST00000554258 TSTD1Q8NFU3 115 aa18.49■□□□□ 0.55
NEK9-204ENST00000554258 BPIFB1Q8TDL5 484 aa18.49■□□□□ 0.55
NEK9-204ENST00000554258 OXER1Q8TDS5 423 aa18.49■□□□□ 0.55
NEK9-204ENST00000554258 ACDQ96AP0 544 aa18.49■□□□□ 0.55
NEK9-204ENST00000554258 FOXP1Q9H334 677 aaPredicted RBP18.49■□□□□ 0.55
NEK9-204ENST00000554258 OBP2AQ9NY56 170 aa18.49■□□□□ 0.55
NEK9-204ENST00000554258 A0A1B0GUA9 196 aa18.48■□□□□ 0.55
NEK9-204ENST00000554258 BTBD18B2RXH4 712 aa18.48■□□□□ 0.55
NEK9-204ENST00000554258 CFIP05156 583 aa18.48■□□□□ 0.55
NEK9-204ENST00000554258 KRT2P35908 639 aa18.48■□□□□ 0.55
NEK9-204ENST00000554258 ABCG1P45844 678 aa18.48■□□□□ 0.55
NEK9-204ENST00000554258 SLC23A3Q6PIS1 610 aa18.48■□□□□ 0.55
NEK9-204ENST00000554258 IFNLR1Q8IU57 520 aaPredicted RBP18.48■□□□□ 0.55
NEK9-204ENST00000554258 SPRYD3Q8NCJ5 442 aa18.48■□□□□ 0.55
NEK9-204ENST00000554258 CXCL16Q9H2A7 254 aa18.48■□□□□ 0.55
NEK9-204ENST00000554258 CLMPQ9H6B4 373 aa18.48■□□□□ 0.55
NEK9-204ENST00000554258 THG1LQ9NWX6 298 aaKnown RBP18.48■□□□□ 0.55
NEK9-204ENST00000554258 PCDHB9Q9Y5E1 797 aa18.48■□□□□ 0.55
NEK9-204ENST00000554258 PTPRDP23468 1912 aa18.48■□□□□ 0.55
NEK9-204ENST00000554258 EDIL3O43854 480 aa18.47■□□□□ 0.55
NEK9-204ENST00000554258 DRD1P21728 446 aa18.47■□□□□ 0.55
NEK9-204ENST00000554258 BRCC3P46736 316 aa18.47■□□□□ 0.55
NEK9-204ENST00000554258 QARSP47897 775 aaKnown RBP18.47■□□□□ 0.55
NEK9-204ENST00000554258 CLCNKBP51801 687 aa18.47■□□□□ 0.55
NEK9-204ENST00000554258 FOSBP53539 338 aa18.47■□□□□ 0.55
NEK9-204ENST00000554258 SAFBQ15424 915 aaKnown RBP eCLIP18.47■□□□□ 0.55
NEK9-204ENST00000554258 FBXO43Q4G163 708 aa18.47■□□□□ 0.55
NEK9-204ENST00000554258 B3GNT9Q6UX72 402 aa18.47■□□□□ 0.55
NEK9-204ENST00000554258 ARMCX6Q7L4S7 300 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms