RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 VITQ6UXI7 678 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 DSTYKQ6XUX3 929 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 RNF19BQ6ZMZ0 732 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 PRR23BQ6ZRT6 265 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 C4orf32Q8N8J7 132 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 ZBTB44Q8NCP5 570 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 FAM200AQ8TCP9 573 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 GPT2Q8TD30 523 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 DEPDC1BQ8WUY9 529 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 PDLIM2Q96JY6 352 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 PGLYRP2Q96PD5 576 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 PLIN2Q99541 437 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 TIPINQ9BVW5 301 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 FAM126AQ9BYI3 521 aaPredicted RBP9.61□□□□□ -0.87
TDP1-208ENST00000553989 EPC1Q9H2F5 836 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 ZNF334Q9HCZ1 680 aaPredicted RBP9.61□□□□□ -0.87
TDP1-208ENST00000553989 PRMT8Q9NR22 394 aaPredicted RBP9.61□□□□□ -0.87
TDP1-208ENST00000553989 DLL3Q9NYJ7 618 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 CCDC39Q9UFE4 941 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 KCNG1Q9UIX4 513 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 SMC3Q9UQE7 1217 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 YIPF1Q9Y548 306 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 TIMM13Q9Y5L4 95 aaPredicted RBP9.61□□□□□ -0.87
TDP1-208ENST00000553989 FANCMQ8IYD8 2048 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 NOTCH4Q99466 2003 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 A0A1W2PRU2 124 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 H0YCG3 227 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 XPOTO43592 962 aaKnown RBP9.6□□□□□ -0.87
TDP1-208ENST00000553989 TBC1D4O60343 1298 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 OR4Q2P0C623 313 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 ZSCAN22P10073 491 aaPredicted RBP9.6□□□□□ -0.87
TDP1-208ENST00000553989 PLS3P13797 630 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 CCNE1P24864 410 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 PRPHP41219 470 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 ALDH1A3P47895 512 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 LIG4P49917 911 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 KPNA1P52294 538 aaPredicted RBP9.6□□□□□ -0.87
TDP1-208ENST00000553989 EPHB3P54753 998 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 MAPK7Q13164 816 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 MRPL58Q14197 206 aaKnown RBP9.6□□□□□ -0.87
TDP1-208ENST00000553989 SLC10A6Q3KNW5 377 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 POTEHQ6S545 545 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 TMEM92Q6UXU6 159 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 C1orf186Q6ZWK4 172 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 KCNK18Q7Z418 384 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 ZSWIM3Q96MP5 696 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 IER2Q9BTL4 223 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 RBSNQ9H1K0 784 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 CHRDQ9H2X0 955 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 TSPY26PQ9H489 355 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 LMAN1LQ9HAT1 526 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 CEP72Q9P209 647 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 MAFFQ9ULX9 164 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 UBQLN1Q9UMX0 589 aaKnown RBP9.6□□□□□ -0.87
TDP1-208ENST00000553989 KIF3AQ9Y496 699 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 OTOGLQ3ZCN5 2332 aa9.6□□□□□ -0.87
TDP1-208ENST00000553989 VWA3AA6NCI4 1184 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 SLC38A8A6NNN8 435 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 HEPACAM2A8MVW5 462 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 PRR5-ARHGAP8B1AHC4 643 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 K7ENM7 598 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 ABLIM1O14639 778 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 HNRNPDLO14979 420 aaKnown RBP9.59□□□□□ -0.87
TDP1-208ENST00000553989 LILRB5O75023 590 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 CLTAP09496 248 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 MAPTP10636 758 aaKnown RBP9.59□□□□□ -0.87
TDP1-208ENST00000553989 GUCY2CP25092 1073 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 U2AF2P26368 475 aaKnown RBP eCLIP9.59□□□□□ -0.87
TDP1-208ENST00000553989 TOB1P50616 345 aaPredicted RBP9.59□□□□□ -0.87
TDP1-208ENST00000553989 ARHGAP8P85298 464 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 PKP1Q13835 747 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 LRRC32Q14392 662 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 ZPBP2Q6X784 338 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 MAP4K3Q8IVH8 894 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 MFSD6LQ8IWD5 586 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 TMEM130Q8N3G9 435 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 TMEM161BQ8NDZ6 487 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 RASSF8Q8NHQ8 419 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 SHKBP1Q8TBC3 707 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 SPIRE2Q8WWL2 714 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 E2F7Q96AV8 911 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 OXCT2Q9BYC2 517 aaPredicted RBP9.59□□□□□ -0.87
TDP1-208ENST00000553989 FAM117AQ9C073 453 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 GPR88Q9GZN0 384 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 PLEKHA5Q9HAU0 1116 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 LARSQ9P2J5 1176 aaKnown RBP9.59□□□□□ -0.87
TDP1-208ENST00000553989 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.59□□□□□ -0.87
TDP1-208ENST00000553989 CITO14578 2027 aa9.59□□□□□ -0.87
TDP1-208ENST00000553989 DCHS1Q96JQ0 3298 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 NPHP3-ACAD11A0A0J9YXS1 232 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 OR6C75A6NL08 312 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 M0QZQ0 153 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 NRG2O14511 850 aaPredicted RBP9.58□□□□□ -0.88
TDP1-208ENST00000553989 MEFVO15553 781 aaPredicted RBP9.58□□□□□ -0.88
TDP1-208ENST00000553989 STX6O43752 255 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 ZNF500O60304 480 aaPredicted RBP9.58□□□□□ -0.88
TDP1-208ENST00000553989 MOSPD3O75425 235 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 KRT18P05783 430 aaKnown RBP9.58□□□□□ -0.88
TDP1-208ENST00000553989 PLA2G4BP0C869 781 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 ODC1P11926 461 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms