RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 TBX21Q9UL17 535 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 ADAMTS5Q9UNA0 930 aa3.83□□□□□ -1.8
SLIRP-202ENST00000553981 PRUNE2Q8WUY3 3088 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 LRRC37A2A6NM11 1700 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 NARSO43776 548 aaKnown RBP3.82□□□□□ -1.8
SLIRP-202ENST00000553981 SOD2P04179 222 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 LDHCP07864 332 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 CLTBP09497 229 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 CSF2RAP15509 400 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 CR2P20023 1033 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 ACO1P21399 889 aaKnown RBP3.82□□□□□ -1.8
SLIRP-202ENST00000553981 KCNQ1P51787 676 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 RABGGTBP53611 331 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 RAC3P60763 192 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 ATP8B2P98198 1209 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 ABHD18Q0P651 414 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 PABPC4Q13310 644 aaKnown RBP eCLIP3.82□□□□□ -1.83e-8■□□□□ 8.6
SLIRP-202ENST00000553981 TOP3AQ13472 1001 aaPredicted RBP3.82□□□□□ -1.8
SLIRP-202ENST00000553981 HSP90AA2PQ14568 343 aaPredicted RBP3.82□□□□□ -1.8
SLIRP-202ENST00000553981 GPNMBQ14956 572 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 CERKLQ49MI3 558 aaPredicted RBP3.82□□□□□ -1.8
SLIRP-202ENST00000553981 WDR78Q5VTH9 848 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 MFSD14CQ5VZR4 134 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 SPTY2D1Q68D10 685 aaPredicted RBP3.82□□□□□ -1.8
SLIRP-202ENST00000553981 ZNF365Q70YC5 407 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 SPICE1Q8N0Z3 855 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 CELF2-AS1Q8N7Q2 184 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 SH3RF2Q8TEC5 729 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 NUP88Q99567 741 aaPredicted RBP3.82□□□□□ -1.8
SLIRP-202ENST00000553981 ZFYVE21Q9BQ24 234 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 DHX36Q9H2U1 1008 aaKnown RBP3.82□□□□□ -1.8
SLIRP-202ENST00000553981 SLC39A2Q9NP94 309 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 OAZ3Q9UMX2 235 aa3.82□□□□□ -1.8
SLIRP-202ENST00000553981 NOP58Q9Y2X3 529 aaKnown RBP3.82□□□□□ -1.8
SLIRP-202ENST00000553981 SYNRGQ9UMZ2 1314 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 ESYT3A0FGR9 886 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 BLACEA4D250 179 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 PRODHO43272 600 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 PQBP1O60828 265 aaKnown RBP3.81□□□□□ -1.8
SLIRP-202ENST00000553981 CUTAO60888 179 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 IDH1O75874 414 aaKnown RBP3.81□□□□□ -1.8
SLIRP-202ENST00000553981 ZNF202O95125 648 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 MAP4K4O95819 1239 aaPredicted RBP3.81□□□□□ -1.8
SLIRP-202ENST00000553981 TIMP1P01033 207 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 CD4P01730 458 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 FGRP09769 529 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 UQCRFS1P1P0C7P4 283 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 FGFR1P11362 822 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 CYP2C18P33260 490 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 PLA2G5P39877 138 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 ACLYP53396 1101 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 RRADP55042 308 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 GPR85P60893 370 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 GSTO1P78417 241 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 DGCR2P98153 550 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 BEX3Q00994 111 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 PTH1RQ03431 593 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 DBPQ10586 325 aaPredicted RBP3.81□□□□□ -1.8
SLIRP-202ENST00000553981 MAP3K12Q12852 859 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 DUSP8Q13202 625 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 COG2Q14746 738 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 NOLC1Q14978 699 aaKnown RBP eCLIP3.81□□□□□ -1.8
SLIRP-202ENST00000553981 ABCB5Q2M3G0 1257 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 LSM12Q3MHD2 195 aaKnown RBP3.81□□□□□ -1.8
SLIRP-202ENST00000553981 TTC39AQ5SRH9 613 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 MAMDC4Q6UXC1 1216 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 ANKRD33Q7Z3H0 272 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 POLNQ7Z5Q5 900 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 DPP9Q86TI2 863 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 IFNL3Q8IZI9 196 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 SHCBP1Q8NEM2 672 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 TET1Q8NFU7 2136 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.81□□□□□ -1.8
SLIRP-202ENST00000553981 HNRNPLLQ8WVV9 542 aaKnown RBP3.81□□□□□ -1.8
SLIRP-202ENST00000553981 OSBP2Q969R2 916 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 TIFAQ96CG3 184 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 CHFRQ96EP1 664 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 SGSM3Q96HU1 749 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 RNPC3Q96LT9 517 aaKnown RBP3.81□□□□□ -1.8
SLIRP-202ENST00000553981 ASB2Q96Q27 587 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 DPYSL5Q9BPU6 564 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 LBHD1Q9BQE6 289 aaPredicted RBP3.81□□□□□ -1.8
SLIRP-202ENST00000553981 AARSD1Q9BTE6 412 aaKnown RBP3.81□□□□□ -1.8
SLIRP-202ENST00000553981 CD244Q9BZW8 370 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 CSRNP2Q9H175 543 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 WNT8AQ9H1J5 351 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 IPPKQ9H8X2 491 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 GPR108Q9NPR9 543 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 ARHGEF4Q9NR80 690 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 ST7Q9NRC1 585 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 C11orf21Q9P2W6 132 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 SERPINB13Q9UIV8 391 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 SLC30A1Q9Y6M5 507 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 PCSK5Q92824 1860 aa3.81□□□□□ -1.8
SLIRP-202ENST00000553981 ROBO3Q96MS0 1386 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 ZBED9Q6R2W3 1325 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 ZNF532Q9HCE3 1301 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.8□□□□□ -1.8
SLIRP-202ENST00000553981 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.8□□□□□ -1.8
SLIRP-202ENST00000553981 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms