RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 JADE1Q6IE81 842 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 SLC39A4Q6P5W5 647 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 ANKS3Q6ZW76 656 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 USP37Q86T82 979 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 XXYLT1Q8NBI6 393 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 HPS3Q969F9 1004 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 SMARCE1Q969G3 411 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 SAAL1Q96ER3 474 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 ANKRD36BP1Q96IX9 119 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 ZNF560Q96MR9 790 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 TIGD1Q96MW7 591 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 GBP4Q96PP9 640 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 KLHL5Q96PQ7 755 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 FNBP1Q96RU3 617 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 POP1Q99575 1024 aaKnown RBP9.02□□□□□ -0.97
PSEN1-209ENST00000553855 GPR62Q9BZJ7 368 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 GOLPH3LQ9H4A5 285 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 FNIP2Q9P278 1114 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 C2CD2Q9Y426 696 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 HCFC2Q9Y5Z7 792 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 MYH11P35749 1972 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 LAMA2P24043 3122 aaKnown RBP9.01□□□□□ -0.97
PSEN1-209ENST00000553855 GOLGA8IPA6NC78 632 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 GOLGA8JA6NMD2 632 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 TISP43B9A030 160 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 SYN3O14994 580 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 CLIC2O15247 247 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 LINC01565O15544 149 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 ZBTB24O43167 697 aaPredicted RBP9.01□□□□□ -0.97
PSEN1-209ENST00000553855 PRPF40AO75400 957 aaKnown RBP9.01□□□□□ -0.97
PSEN1-209ENST00000553855 RHOBTB3O94955 611 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 CNPP09543 421 aaKnown RBP9.01□□□□□ -0.97
PSEN1-209ENST00000553855 RPL13P26373 211 aaKnown RBP9.01□□□□□ -0.97
PSEN1-209ENST00000553855 WEE1P30291 646 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 ADSSP30520 456 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 LRPAP1P30533 357 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 ELF1P32519 619 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 PNPLA4P41247 253 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 CYP2J2P51589 502 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 UBE2HP62256 183 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 TFAMQ00059 246 aaKnown RBP9.01□□□□□ -0.97
PSEN1-209ENST00000553855 ITIH3Q06033 890 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 SMAD4Q13485 552 aaKnown RBP9.01□□□□□ -0.97
PSEN1-209ENST00000553855 KCNB1Q14721 858 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 NAB2Q15742 525 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 CTC1Q2NKJ3 1217 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 LIN9Q5TKA1 542 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 KIAA0319Q5VV43 1072 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 SPATA1Q5VX52 437 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 ANKRD54Q6NXT1 300 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 EPM2AIP1Q7L775 607 aaPredicted RBP9.01□□□□□ -0.97
PSEN1-209ENST00000553855 TAS1R1Q7RTX1 841 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 METTL23Q86XA0 190 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 GLYCTKQ8IVS8 523 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 BRSK2Q8IWQ3 736 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 FMR1NBQ8N0W7 255 aaPredicted RBP9.01□□□□□ -0.97
PSEN1-209ENST00000553855 SCFD1Q8WVM8 642 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 PIK3R5Q8WYR1 880 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 C18orf25Q96B23 403 aaPredicted RBP9.01□□□□□ -0.97
PSEN1-209ENST00000553855 RIPOR3Q96MK2 946 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 ZMAT2Q96NC0 199 aaKnown RBP9.01□□□□□ -0.97
PSEN1-209ENST00000553855 IPO9Q96P70 1041 aaKnown RBP9.01□□□□□ -0.97
PSEN1-209ENST00000553855 PAAF1Q9BRP4 392 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 CBWD1Q9BRT8 395 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 PRKD2Q9BZL6 878 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 HAPLN2Q9GZV7 340 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 PLEKHA4Q9H4M7 779 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 RXFP1Q9HBX9 757 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 AGPAT3Q9NRZ7 376 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 CHST7Q9NS84 486 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 DPP3Q9NY33 737 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 HSPBP1Q9NZL4 362 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 TUBGCP4Q9UGJ1 667 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 BARX2Q9UMQ3 279 aaPredicted RBP9.01□□□□□ -0.97
PSEN1-209ENST00000553855 FRMD4BQ9Y2L6 1034 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 MAP4K5Q9Y4K4 846 aa9.01□□□□□ -0.97
PSEN1-209ENST00000553855 PRRC2BQ5JSZ5 2229 aaKnown RBP9.01□□□□□ -0.97
PSEN1-209ENST00000553855 F8W810 466 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 TEX28O15482 410 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 KLRC4O43908 158 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 ICMTO60725 284 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 C1RP00736 705 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 ADRB2P07550 413 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 KRT19P08727 400 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 ODC1P11926 461 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 TNNI1P19237 187 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 FGFR3P22607 806 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 VARSP26640 1264 aaKnown RBP9□□□□□ -0.97
PSEN1-209ENST00000553855 PPP1R2P41236 205 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 MTHFRP42898 656 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 BRCC3P46736 316 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 TAF6P49848 677 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 KCNQ1P51787 676 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 RAB15P59190 212 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 SOX4Q06945 474 aaPredicted RBP9□□□□□ -0.97
PSEN1-209ENST00000553855 EHHADHQ08426 723 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 STK4Q13043 487 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 ZNF211Q13398 564 aaPredicted RBP9□□□□□ -0.97
PSEN1-209ENST00000553855 COL19A1Q14993 1142 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 DUOXA2Q1HG44 320 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms