RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 C12orf50Q8NA57 414 aaPredicted RBP12.88□□□□□ -0.35
SRP54-203ENST00000553544 SPIRE2Q8WWL2 714 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 KCNN1Q92952 543 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 SNX21Q969T3 373 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 LOXL4Q96JB6 756 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 PLIN2Q99541 437 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 ACO2Q99798 780 aaKnown RBP12.88□□□□□ -0.35
SRP54-203ENST00000553544 CCDC94Q9BW85 323 aaPredicted RBP12.88□□□□□ -0.35
SRP54-203ENST00000553544 SLITRK6Q9H5Y7 841 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 BLOC1S4Q9NUP1 217 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 CEP72Q9P209 647 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 AFF4Q9UHB7 1163 aaKnown RBP12.88□□□□□ -0.35
SRP54-203ENST00000553544 KCNG1Q9UIX4 513 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 FBXL5Q9UKA1 691 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 MTMR6Q9Y217 621 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 NUB1Q9Y5A7 615 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 CLIC4Q9Y696 253 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 ATRXP46100 2492 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 VWA8A3KMH1 1905 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 CEP295Q9C0D2 2601 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 ARNTLO00327 626 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 PODXLO00592 558 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 ABLIM1O14639 778 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 TM4SF5O14894 197 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 MOSPD3O75425 235 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 ZNF806P0C7X5 589 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 PLS3P13797 630 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 GJA1P17302 382 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 PROZP22891 400 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 MARCKSP29966 332 aaPredicted RBP12.87□□□□□ -0.35
SRP54-203ENST00000553544 UBA7P41226 1012 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 EPHA5P54756 1037 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 TWF1Q12792 350 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 XKR4Q5GH76 650 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 FAM173BQ6P4H8 233 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 RALGPS2Q86X27 583 aaPredicted RBP12.87□□□□□ -0.35
SRP54-203ENST00000553544 SYNPOQ8N3V7 929 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 TMEM161BQ8NDZ6 487 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 APPL2Q8NEU8 664 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 FAM200AQ8TCP9 573 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 CDK5RAP3Q96JB5 506 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 CCSER1Q9C0I3 900 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 ARRDC1-AS1Q9H2J1 176 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 KMT5AQ9NQR1 393 aa12.87□□□□□ -0.35
SRP54-203ENST00000553544 RBM12Q9NTZ6 932 aaKnown RBP12.87□□□□□ -0.35
SRP54-203ENST00000553544 MORC2Q9Y6X9 1032 aaPredicted RBP12.87□□□□□ -0.35
SRP54-203ENST00000553544 SDK1Q7Z5N4 2213 aa12.86□□□□□ -0.35
SRP54-203ENST00000553544 MYBPHLA2RUH7 354 aa12.86□□□□□ -0.35
SRP54-203ENST00000553544 SLC16A4O15374 487 aa12.86□□□□□ -0.35
SRP54-203ENST00000553544 GRM5P41594 1212 aa12.86□□□□□ -0.35
SRP54-203ENST00000553544 SOX4Q06945 474 aaPredicted RBP12.86□□□□□ -0.35
SRP54-203ENST00000553544 RAD51AP2Q09MP3 1159 aa12.86□□□□□ -0.35
SRP54-203ENST00000553544 TEAD2Q15562 447 aa12.86□□□□□ -0.35
SRP54-203ENST00000553544 CACNA2D4Q7Z3S7 1137 aa12.86□□□□□ -0.35
SRP54-203ENST00000553544 WDR5BQ86VZ2 330 aa12.86□□□□□ -0.35
SRP54-203ENST00000553544 CALML4Q96GE6 196 aa12.86□□□□□ -0.35
SRP54-203ENST00000553544 TARS2Q9BW92 718 aaKnown RBP12.86□□□□□ -0.35
SRP54-203ENST00000553544 MRPL4Q9BYD3 311 aaKnown RBP12.86□□□□□ -0.35
SRP54-203ENST00000553544 FBXO2Q9UK22 296 aaPredicted RBP12.86□□□□□ -0.35
SRP54-203ENST00000553544 NPHP3-ACAD11A0A0J9YXS1 232 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 SLC38A8A6NNN8 435 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 SPECC1L-ADORA2AF8WAN1 911 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 DPYSL4O14531 572 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 STX6O43752 255 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 KCNE1P15382 129 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 PLCG1P19174 1290 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 ZNF131P52739 623 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 OSTNP61366 133 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 FCHO2Q0JRZ9 810 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 KARSQ15046 597 aaKnown RBP12.85□□□□□ -0.35
SRP54-203ENST00000553544 SF3A2Q15428 464 aaKnown RBP12.85□□□□□ -0.35
SRP54-203ENST00000553544 STPG1Q5TH74 334 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 ZNF280DQ6N043 979 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 Q6ZS52 159 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 USP49Q70CQ1 688 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 HAUS6Q7Z4H7 955 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 ARID3BQ8IVW6 561 aaPredicted RBP12.85□□□□□ -0.35
SRP54-203ENST00000553544 CEP120Q8N960 986 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 SHKBP1Q8TBC3 707 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 SUSD3Q96L08 255 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 ACAP3Q96P50 834 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 TCHPQ9BT92 498 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 CDT1Q9H211 546 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 ZSCAN16Q9H4T2 348 aaPredicted RBP12.85□□□□□ -0.35
SRP54-203ENST00000553544 LARSQ9P2J5 1176 aaKnown RBP12.85□□□□□ -0.35
SRP54-203ENST00000553544 RALYQ9UKM9 306 aaKnown RBP12.85□□□□□ -0.35
SRP54-203ENST00000553544 ODF2LQ9ULJ1 636 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 SRPRBQ9Y5M8 271 aaKnown RBP12.85□□□□□ -0.35
SRP54-203ENST00000553544 ANK1P16157 1881 aa12.85□□□□□ -0.35
SRP54-203ENST00000553544 FAM208BQ5VWN6 2430 aa12.84□□□□□ -0.35
SRP54-203ENST00000553544 A0A1W2PRU2 124 aa12.84□□□□□ -0.35
SRP54-203ENST00000553544 RPP40O75818 363 aaKnown RBP12.84□□□□□ -0.35
SRP54-203ENST00000553544 PROS1P07225 676 aa12.84□□□□□ -0.35
SRP54-203ENST00000553544 MAPTP10636 758 aaKnown RBP12.84□□□□□ -0.35
SRP54-203ENST00000553544 MCF2P10911 925 aa12.84□□□□□ -0.35
SRP54-203ENST00000553544 CPB1P15086 417 aa12.84□□□□□ -0.35
SRP54-203ENST00000553544 CTHP32929 405 aa12.84□□□□□ -0.35
SRP54-203ENST00000553544 MCM4P33991 863 aa12.84□□□□□ -0.35
SRP54-203ENST00000553544 DDIT3P35638 169 aa12.84□□□□□ -0.35
SRP54-203ENST00000553544 SOX9P48436 509 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms