RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 STK39Q9UEW8 545 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 POLIQ9UNA4 740 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 MTCH2Q9Y6C9 303 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 XIRP2A4UGR9 3374 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 C2orf71A6NGG8 1288 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 TULP1O00294 542 aaPredicted RBP15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 CYB561D2O14569 222 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 GABRDO14764 452 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 TRAPPC3O43617 180 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 N4BP1O75113 896 aaKnown RBP15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 PHACTR2O75167 634 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 GLUD2P49448 558 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 NOP14P78316 857 aaKnown RBP15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 KCNMA1Q12791 1236 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 MYO1EQ12965 1108 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 TRPC3Q13507 836 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 ZNF699Q32M78 642 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 VARS2Q5ST30 1063 aaKnown RBP15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 WSCD1Q658N2 575 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 PRSS55Q6UWB4 352 aaPredicted RBP15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 OSTM1Q86WC4 334 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 TOP6BLQ8N6T0 577 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 MRPL43Q8N983 215 aaKnown RBP15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 CDX2Q99626 313 aaPredicted RBP15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 TCF25Q9BQ70 676 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 BCO2Q9BYV7 579 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 SIX2Q9NPC8 291 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 MAGEC2Q9UBF1 373 aaPredicted RBP15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 PUF60Q9UHX1 559 aaKnown RBP15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 TIMM13Q9Y5L4 95 aaPredicted RBP15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 SNX9Q9Y5X1 595 aa15.94■□□□□ 0.14
MTHFD1-204ENST00000553405 PRUNE2Q8WUY3 3088 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 LGALS16A8MUM7 142 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 ADAM12O43184 909 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 PRKCSHP14314 528 aaPredicted RBP15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 WDR72Q3MJ13 1102 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 DPH6Q7L8W6 267 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 ADGRD2Q7Z7M1 963 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 DEFB123Q8N688 67 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 UBR7Q8N806 425 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 EHBP1Q8NDI1 1231 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 SPATA18Q8TC71 538 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 RIN2Q8WYP3 895 aaPredicted RBP15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 TATDN2Q93075 761 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 CLSTN3Q9BQT9 956 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 INTS2Q9H0H0 1204 aaKnown RBP15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 VPS16Q9H269 839 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 SMYD3Q9H7B4 428 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 NGRNQ9NPE2 291 aaKnown RBP15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 MTRRQ9UBK8 725 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 BACE2Q9Y5Z0 518 aa15.93■□□□□ 0.14
MTHFD1-204ENST00000553405 A0A1B0GTH6 734 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 BECN2A8MW95 431 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 HCRTO43612 131 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 TACC1O75410 805 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 CNPP09543 421 aaKnown RBP15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 FAM163BP0C2L3 166 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 ODC1P11926 461 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 SLC9A1P19634 815 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 PON1P27169 355 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 APBA1Q02410 837 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 KCNC3Q14003 757 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 COL19A1Q14993 1142 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 ZNF667Q5HYK9 610 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 PLPP4Q5VZY2 271 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 PDE12Q6L8Q7 609 aaKnown RBP15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 TRIM65Q6PJ69 517 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 DSTYKQ6XUX3 929 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 RNF214Q8ND24 703 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 OR10T2Q8NGX3 314 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 FAXDC2Q96IV6 333 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 NAP1L5Q96NT1 182 aaPredicted RBP15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 PKMYT1Q99640 499 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 ARID3AQ99856 593 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 MRPL45Q9BRJ2 306 aaKnown RBP15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 CRACR2AQ9BSW2 395 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 NIF3L1Q9GZT8 377 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 RBSNQ9H1K0 784 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 FNIP2Q9P278 1114 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 SIK3Q9Y2K2 1263 aa15.92■□□□□ 0.14
MTHFD1-204ENST00000553405 COL6A3P12111 3177 aa15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 TEX28O15482 410 aa15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 VNN2O95498 520 aa15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 CXCL14O95715 111 aa15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 URODP06132 367 aa15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 RPL17P18621 184 aaKnown RBP15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 WARSP23381 471 aaKnown RBP15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 SMC1AQ14683 1233 aaKnown RBP15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 PSMD5Q16401 504 aa15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 SLC8B1Q6J4K2 584 aa15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 PHLDB3Q6NSJ2 640 aa15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 ANKS3Q6ZW76 656 aa15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 TMC7Q7Z402 723 aa15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 CREBRFQ8IUR6 639 aa15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 ARHGEF19Q8IW93 802 aa15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 TMEM86AQ8N2M4 240 aa15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 APPL2Q8NEU8 664 aa15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 MYLIPQ8WY64 445 aa15.91■□□□□ 0.14
MTHFD1-204ENST00000553405 KLHL5Q96PQ7 755 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms