RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 HABP4Q5JVS0 413 aaKnown RBP4.67□□□□□ -1.66
USP44-208ENST00000552440 KAZNQ674X7 775 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 TRIM68Q6AZZ1 485 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 MOGAT3Q86VF5 341 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 NLRP10Q86W26 655 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 NOSTRINQ8IVI9 506 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 LZTR1Q8N653 840 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 RSAD2Q8WXG1 361 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 COA7Q96BR5 231 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 CNDP2Q96KP4 475 aaKnown RBP4.67□□□□□ -1.66
USP44-208ENST00000552440 PI4K2AQ9BTU6 479 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 STK33Q9BYT3 514 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 SIL1Q9H173 461 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 C2orf40Q9H1Z8 148 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 VPS33BQ9H267 617 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 ADAM7Q9H2U9 754 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 ZMAT4Q9H898 229 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 SPON1Q9HCB6 807 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 PNPLA8Q9NP80 782 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 OBP2BQ9NPH6 170 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 TRMT1Q9NXH9 659 aaKnown RBP4.67□□□□□ -1.66
USP44-208ENST00000552440 CLDND1Q9NY35 253 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 NTMQ9P121 344 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 RABL2AQ9UBK7 228 aaPredicted RBP4.67□□□□□ -1.66
USP44-208ENST00000552440 GTF3C4Q9UKN8 822 aa4.67□□□□□ -1.66
USP44-208ENST00000552440 ZFP37Q9Y6Q3 630 aaPredicted RBP4.67□□□□□ -1.66
USP44-208ENST00000552440 TMEM110-MUSTN1A8MSY1 372 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 TRIM38O00635 465 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 KCNK3O14649 394 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 KDM1AO60341 852 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 IL11P20809 199 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 CTSSP25774 331 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 PTX3P26022 381 aaPredicted RBP4.66□□□□□ -1.66
USP44-208ENST00000552440 HNF4AP41235 474 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 IL12RB1P42701 662 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 CLCN2P51788 898 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 CASP6P55212 293 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 ARF3P61204 181 aaPredicted RBP4.66□□□□□ -1.66
USP44-208ENST00000552440 ARF1P84077 181 aaKnown RBP4.66□□□□□ -1.66
USP44-208ENST00000552440 VWA3BQ502W6 1294 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 SETMARQ53H47 684 aaPredicted RBP4.66□□□□□ -1.66
USP44-208ENST00000552440 ZNF362Q5T0B9 420 aaPredicted RBP4.66□□□□□ -1.66
USP44-208ENST00000552440 NT5DC1Q5TFE4 455 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 ARHGAP36Q6ZRI8 547 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 THEMISQ8N1K5 641 aaPredicted RBP4.66□□□□□ -1.66
USP44-208ENST00000552440 MIGA1Q8NAN2 632 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 AVL9Q8NBF6 648 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 TOR1AIP2Q8NFQ8 470 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 RUFY2Q8WXA3 655 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 CEP95Q96GE4 821 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 SLC2A13Q96QE2 648 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 YME1L1Q96TA2 773 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 SLX1AQ9BQ83 275 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 KRTAP17-1Q9BYP8 105 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 TRIM6Q9C030 488 aaPredicted RBP4.66□□□□□ -1.66
USP44-208ENST00000552440 TMOD4Q9NZQ9 345 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 MTF2Q9Y483 593 aaPredicted RBP4.66□□□□□ -1.66
USP44-208ENST00000552440 PCDHGB5Q9Y5G0 923 aa4.66□□□□□ -1.66
USP44-208ENST00000552440 H7BY64 318 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 TBCAO75347 108 aaKnown RBP4.65□□□□□ -1.66
USP44-208ENST00000552440 IL18RAPO95256 599 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 GLI4P10075 376 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 PORP16435 677 aaPredicted RBP4.65□□□□□ -1.66
USP44-208ENST00000552440 EEF1GP26641 437 aaKnown RBP4.65□□□□□ -1.66
USP44-208ENST00000552440 KIF11P52732 1056 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 EVCP57679 992 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 HMGN5P82970 282 aaKnown RBP4.65□□□□□ -1.66
USP44-208ENST00000552440 CREMQ03060 361 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 KIAA2012Q0VF49 1180 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 AP1B1Q10567 949 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 DAG1Q14118 895 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 TIGD6Q17RP2 521 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 MMEL1Q495T6 779 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 C5orf22Q49AR2 442 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 HSP90AB3PQ58FF7 597 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 ESRP1Q6NXG1 681 aaKnown RBP4.65□□□□□ -1.66
USP44-208ENST00000552440 FRMD7Q6ZUT3 714 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 RAPH1Q70E73 1250 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 B4GALNT4Q76KP1 1039 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 CCDC91Q7Z6B0 441 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 FAM124AQ86V42 546 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 CCAR2Q8N163 923 aaKnown RBP4.65□□□□□ -1.66
USP44-208ENST00000552440 CARFQ8N187 725 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 Q8N1Y9 231 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 SPATA18Q8TC71 538 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 SPPL3Q8TCT6 385 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 RIN2Q8WYP3 895 aaPredicted RBP4.65□□□□□ -1.66
USP44-208ENST00000552440 NSUN4Q96CB9 384 aaKnown RBP4.65□□□□□ -1.66
USP44-208ENST00000552440 C18orf8Q96DM3 657 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 ACAP3Q96P50 834 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 PCIF1Q9H4Z3 704 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 EIF2B4Q9UI10 523 aaKnown RBP4.65□□□□□ -1.66
USP44-208ENST00000552440 STXBP5LQ9Y2K9 1186 aa4.65□□□□□ -1.66
USP44-208ENST00000552440 A0A1W2PPC4 97 aa4.65□□□□□ -1.67
USP44-208ENST00000552440 H0Y626 953 aa4.65□□□□□ -1.67
USP44-208ENST00000552440 PLOD2O00469 737 aa4.65□□□□□ -1.67
USP44-208ENST00000552440 PES1O00541 588 aaKnown RBP4.65□□□□□ -1.67
USP44-208ENST00000552440 MAN2B1O00754 1011 aa4.65□□□□□ -1.67
USP44-208ENST00000552440 NKRFO15226 690 aaKnown RBP eCLIP4.65□□□□□ -1.67
USP44-208ENST00000552440 SLC7A4O43246 635 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms