RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 ZMAT2Q96NC0 199 aaKnown RBP15.85■□□□□ 0.13
VPS29-209ENST00000551655 EIF2AK1Q9BQI3 630 aaKnown RBP15.85■□□□□ 0.13
VPS29-209ENST00000551655 ADPGKQ9BRR6 497 aa15.85■□□□□ 0.13
VPS29-209ENST00000551655 ATXN3LQ9H3M9 355 aa15.85■□□□□ 0.13
VPS29-209ENST00000551655 EBF3Q9H4W6 596 aa15.85■□□□□ 0.13
VPS29-209ENST00000551655 SLC32A1Q9H598 525 aa15.85■□□□□ 0.13
VPS29-209ENST00000551655 SH3GLB2Q9NR46 395 aa15.85■□□□□ 0.13
VPS29-209ENST00000551655 GKN1Q9NS71 199 aa15.85■□□□□ 0.13
VPS29-209ENST00000551655 ANKFY1Q9P2R3 1169 aa15.85■□□□□ 0.13
VPS29-209ENST00000551655 TNRC6BQ9UPQ9 1833 aaKnown RBP15.84■□□□□ 0.13
VPS29-209ENST00000551655 ANTXRLA6NF34 631 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 EIF4E1BA6NMX2 242 aaKnown RBP15.84■□□□□ 0.13
VPS29-209ENST00000551655 SYN3O14994 580 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 KALRNO60229 2985 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 APBB3O95704 486 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 IFNAR1P17181 557 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 CDR1P51861 262 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 OSTNP61366 133 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 AAMPQ13685 434 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 DMC1Q14565 340 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 TRIM61Q5EBN2 209 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 RNF20Q5VTR2 975 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 ZNF280DQ6N043 979 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 ARMCX6Q7L4S7 300 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 PIP4P1Q86T03 277 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 TTC9BQ8N6N2 239 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 C18orf25Q96B23 403 aaPredicted RBP15.84■□□□□ 0.13
VPS29-209ENST00000551655 CCDC43Q96MW1 224 aaKnown RBP15.84■□□□□ 0.13
VPS29-209ENST00000551655 KIFC3Q9BVG8 833 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 CCDC113Q9H0I3 377 aa15.84■□□□□ 0.13
VPS29-209ENST00000551655 FAM221BA6H8Z2 402 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 TRDMT1O14717 391 aaKnown RBP15.83■□□□□ 0.12
VPS29-209ENST00000551655 MARCH6O60337 910 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 CCNT1O60563 726 aaKnown RBP15.83■□□□□ 0.12
VPS29-209ENST00000551655 ARSAP15289 507 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 ENGP17813 658 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 GABRR2P28476 465 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 MCM2P49736 904 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 DUSP4Q13115 394 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 MDM1Q8TC05 714 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 DDX12PQ92771 950 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 CRELD1Q96HD1 420 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 ANKEF1Q9NU02 776 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 OBP2AQ9NY56 170 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 MBD1Q9UIS9 605 aaPredicted RBP15.83■□□□□ 0.12
VPS29-209ENST00000551655 KCNJ14Q9UNX9 436 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 SLC27A5Q9Y2P5 690 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 RAXQ9Y2V3 346 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 NUB1Q9Y5A7 615 aa15.83■□□□□ 0.12
VPS29-209ENST00000551655 ATXN2Q99700 1313 aaKnown RBP15.83■□□□□ 0.12
VPS29-209ENST00000551655 PLXNB3Q9ULL4 1909 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 ACKR2O00590 384 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 MCM4P33991 863 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 GALK1P51570 392 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 PLCB2Q00722 1185 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 RUNX3Q13761 415 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 MAPK6Q16659 721 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 DCAF4L1Q3SXM0 396 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 NT5DC1Q5TFE4 455 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 PPP4R3AQ6IN85 833 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 SYT13Q7L8C5 426 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 RAB44Q7Z6P3 723 aaPredicted RBP15.82■□□□□ 0.12
VPS29-209ENST00000551655 NEK8Q86SG6 692 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 DAGLBQ8NCG7 672 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 RIN3Q8TB24 985 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 HSD17B14Q9BPX1 270 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 FAM83CQ9BQN1 747 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 POLD4Q9HCU8 107 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 TMEM74BQ9NUR3 256 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 EBF1Q9UH73 591 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 CCL26Q9Y258 94 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 TIMM13Q9Y5L4 95 aaPredicted RBP15.82■□□□□ 0.12
VPS29-209ENST00000551655 PTPRDP23468 1912 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 APC2O95996 2303 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 NAV2Q8IVL1 2488 aa15.82■□□□□ 0.12
VPS29-209ENST00000551655 LYPLA2O95372 231 aa15.81■□□□□ 0.12
VPS29-209ENST00000551655 EPHB3P54753 998 aa15.81■□□□□ 0.12
VPS29-209ENST00000551655 PSMD2Q13200 908 aa15.81■□□□□ 0.12
VPS29-209ENST00000551655 SEMA3BQ13214 749 aa15.81■□□□□ 0.12
VPS29-209ENST00000551655 KRT25Q7Z3Z0 450 aa15.81■□□□□ 0.12
VPS29-209ENST00000551655 DNAJB7Q7Z6W7 309 aaPredicted RBP15.81■□□□□ 0.12
VPS29-209ENST00000551655 BEST2Q8NFU1 509 aa15.81■□□□□ 0.12
VPS29-209ENST00000551655 SUSD3Q96L08 255 aa15.81■□□□□ 0.12
VPS29-209ENST00000551655 TBC1D32Q96NH3 1257 aa15.81■□□□□ 0.12
VPS29-209ENST00000551655 CACNA2D2Q9NY47 1150 aa15.81■□□□□ 0.12
VPS29-209ENST00000551655 FAM205CA6NFA0 338 aa15.8■□□□□ 0.12
VPS29-209ENST00000551655 DTNBO60941 627 aa15.8■□□□□ 0.12
VPS29-209ENST00000551655 TSGA10IPQ3SY00 556 aa15.8■□□□□ 0.12
VPS29-209ENST00000551655 EARS2Q5JPH6 523 aaKnown RBP15.8■□□□□ 0.12
VPS29-209ENST00000551655 ATF7IP2Q5U623 682 aa15.8■□□□□ 0.12
VPS29-209ENST00000551655 ANO7Q6IWH7 933 aa15.8■□□□□ 0.12
VPS29-209ENST00000551655 ALKAL1Q6UXT8 129 aa15.8■□□□□ 0.12
VPS29-209ENST00000551655 FRMD1Q8N878 549 aa15.8■□□□□ 0.12
VPS29-209ENST00000551655 ATAD1Q8NBU5 361 aa15.8■□□□□ 0.12
VPS29-209ENST00000551655 GLIS3Q8NEA6 775 aa15.8■□□□□ 0.12
VPS29-209ENST00000551655 TSTD1Q8NFU3 115 aa15.8■□□□□ 0.12
VPS29-209ENST00000551655 OR2I1PQ8NGU4 316 aa15.8■□□□□ 0.12
VPS29-209ENST00000551655 RLN3Q8WXF3 142 aa15.8■□□□□ 0.12
VPS29-209ENST00000551655 LPIN3Q9BQK8 851 aa15.8■□□□□ 0.12
VPS29-209ENST00000551655 SLC46A2Q9BY10 475 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms