RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 PUM1Q14671 1186 aaKnown RBP eCLIP19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 JADE1Q6IE81 842 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 CENPPQ6IPU0 288 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 TTC8Q8TAM2 541 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 MKNK1Q9BUB5 465 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 EPC1Q9H2F5 836 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 SLITRK6Q9H5Y7 841 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 RBM12Q9NTZ6 932 aaKnown RBP19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 LARSQ9P2J5 1176 aaKnown RBP19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 MAFFQ9ULX9 164 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 A0A0B4J269 797 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 MTMR11A4FU01 709 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 ANKRD63C9JTQ0 380 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 ZNF263O14978 683 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 OGTO15294 1046 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 NFICP08651 508 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 CHRNB1P11230 501 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 CYP3A5P20815 502 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 LILRA4P59901 499 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 GPR17Q13304 367 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 LPAL2Q16609 132 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 SPATA1Q5VX52 437 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 GAREM2Q75VX8 874 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 USP37Q86T82 979 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 MYCT1Q8N699 235 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 OR10T2Q8NGX3 314 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 SENP8Q96LD8 212 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 FIZ1Q96SL8 496 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 RPF1Q9H9Y2 349 aaKnown RBP19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 PARD6AQ9NPB6 346 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 TRPV5Q9NQA5 729 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 KCND2Q9NZV8 630 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 KCNG1Q9UIX4 513 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 TSC2P49815 1807 aa19.44■□□□□ 0.7
PRPF40B-215ENST00000551418 SPTBN2O15020 2390 aa19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 OR6C75A6NL08 312 aa19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 HNRNPDLO14979 420 aaKnown RBP19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 PIGRP01833 764 aa19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 NMT1P30419 496 aaKnown RBP19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 SATB1Q01826 763 aa19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 DMWDQ09019 674 aa19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 ZC2HC1CQ53FD0 456 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 ARL6IP4Q66PJ3 421 aaKnown RBP19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 OVOS1Q6IE37 1185 aa19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 DNAJB7Q7Z6W7 309 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 ARID3BQ8IVW6 561 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 LEMD2Q8NC56 503 aa19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 DEPDC1BQ8WUY9 529 aa19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 KCNN1Q92952 543 aa19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 ZFYVE19Q96K21 471 aa19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 C2orf42Q9NWW7 574 aa19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 CPSF3Q9UKF6 684 aaKnown RBP19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 KIF26AQ9ULI4 1882 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-215ENST00000551418 SLC38A8A6NNN8 435 aa19.42■□□□□ 0.7
PRPF40B-215ENST00000551418 K7ENM7 598 aa19.42■□□□□ 0.7
PRPF40B-215ENST00000551418 FAM13AO94988 1023 aa19.42■□□□□ 0.7
PRPF40B-215ENST00000551418 PLCG1P19174 1290 aa19.42■□□□□ 0.7
PRPF40B-215ENST00000551418 ACOT2P49753 483 aa19.42■□□□□ 0.7
PRPF40B-215ENST00000551418 ZNF131P52739 623 aa19.42■□□□□ 0.7
PRPF40B-215ENST00000551418 EPHB3P54753 998 aa19.42■□□□□ 0.7
PRPF40B-215ENST00000551418 KARSQ15046 597 aaKnown RBP19.42■□□□□ 0.7
PRPF40B-215ENST00000551418 C9orf57Q5W0N0 161 aa19.42■□□□□ 0.7
PRPF40B-215ENST00000551418 TXNDC11Q6PKC3 985 aa19.42■□□□□ 0.7
PRPF40B-215ENST00000551418 KCTD17Q8N5Z5 321 aa19.42■□□□□ 0.7
PRPF40B-215ENST00000551418 LPIN3Q9BQK8 851 aa19.42■□□□□ 0.7
PRPF40B-215ENST00000551418 MSTO1Q9BUK6 570 aa19.42■□□□□ 0.7
PRPF40B-215ENST00000551418 ZHX3Q9H4I2 956 aa19.42■□□□□ 0.7
PRPF40B-215ENST00000551418 ODF2LQ9ULJ1 636 aa19.42■□□□□ 0.7
PRPF40B-215ENST00000551418 H3BQV1 296 aa19.41■□□□□ 0.7
PRPF40B-215ENST00000551418 PIRO00625 290 aa19.41■□□□□ 0.7
PRPF40B-215ENST00000551418 TRAK2O60296 914 aa19.41■□□□□ 0.7
PRPF40B-215ENST00000551418 TYMPP19971 482 aa19.41■□□□□ 0.7
PRPF40B-215ENST00000551418 ALDH1A3P47895 512 aa19.41■□□□□ 0.7
PRPF40B-215ENST00000551418 RABEP1Q15276 862 aa19.41■□□□□ 0.7
PRPF40B-215ENST00000551418 MAMSTRQ6ZN01 415 aa19.41■□□□□ 0.7
PRPF40B-215ENST00000551418 ANO9A1A5B4 782 aa19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 H0YCG3 227 aa19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 UBA7P41226 1012 aa19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 FCHO2Q0JRZ9 810 aa19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 SRSF5Q13243 272 aaKnown RBP19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 MYBPC2Q14324 1141 aa19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 SCARA3Q6AZY7 606 aa19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 Q6ZS52 159 aa19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 USP49Q70CQ1 688 aa19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 LRRTM3Q86VH5 581 aa19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 RAD54LQ92698 747 aa19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 GPR88Q9GZN0 384 aa19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 SMG9Q9H0W8 520 aaKnown RBP19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 ATXN3LQ9H3M9 355 aa19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 PARVGQ9HBI0 331 aa19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 GTSE1Q9NYZ3 720 aa19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 KIF3AQ9Y496 699 aa19.4■□□□□ 0.7
PRPF40B-215ENST00000551418 CHADO15335 359 aa19.39■□□□□ 0.69
PRPF40B-215ENST00000551418 HRO43593 1189 aa19.39■□□□□ 0.69
PRPF40B-215ENST00000551418 PRAMEF12O95522 483 aa19.39■□□□□ 0.69
PRPF40B-215ENST00000551418 GABRR2P28476 465 aa19.39■□□□□ 0.69
PRPF40B-215ENST00000551418 ATXN1P54253 815 aaKnown RBP19.39■□□□□ 0.69
PRPF40B-215ENST00000551418 CYP4F8P98187 520 aa19.39■□□□□ 0.69
PRPF40B-215ENST00000551418 GTF2BQ00403 316 aa19.39■□□□□ 0.69
PRPF40B-215ENST00000551418 TNK2Q07912 1038 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms