RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 PRELID2Q8N945 189 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 EIF1ADQ8N9N8 165 aaKnown RBP12.25□□□□□ -0.45
RAB5C-208ENST00000551338 CCDC26Q8TAB7 109 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 FAM71BQ8TC56 605 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 WHAMMQ8TF30 809 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 ZBTB9Q96C00 473 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 FAXDC2Q96IV6 333 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 ADPGKQ9BRR6 497 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 TRIM51Q9BSJ1 452 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 CELF4Q9BZC1 486 aaKnown RBP12.25□□□□□ -0.45
RAB5C-208ENST00000551338 NEUROG2Q9H2A3 272 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 SMYD3Q9H7B4 428 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 CDHR5Q9HBB8 845 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.25□□□□□ -0.45
RAB5C-208ENST00000551338 NXF1Q9UBU9 619 aaKnown RBP12.25□□□□□ -0.45
RAB5C-208ENST00000551338 AMACRQ9UHK6 382 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 GJD2Q9UKL4 321 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 SCINQ9Y6U3 715 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 NRCAMQ92823 1304 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 GOLGA6L10A0A0M3HER8 536 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 TCRBV7S2A1N4TA0A589 114 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 FAM155AB1AL88 458 aaPredicted RBP12.24□□□□□ -0.45
RAB5C-208ENST00000551338 AGPSO00116 658 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 PROSCO94903 275 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 STAU1O95793 577 aaKnown RBP12.24□□□□□ -0.45
RAB5C-208ENST00000551338 SYF2O95926 243 aaKnown RBP12.24□□□□□ -0.45
RAB5C-208ENST00000551338 CALB1P05937 261 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 MYL3P08590 195 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 CTGFP29279 349 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 POLR2BP30876 1174 aaKnown RBP12.24□□□□□ -0.45
RAB5C-208ENST00000551338 ATICP31939 592 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 SLC1A1P43005 524 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 PTGIRP43119 386 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 RAD23BP54727 409 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 RWDD2BP57060 319 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 TMEM62Q0P6H9 643 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 MAMLD1Q13495 774 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 CUL1Q13616 776 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 PPP2R5EQ16537 467 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 CYP1B1Q16678 543 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 FRMPD3Q5JV73 1810 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 DENND1BQ6P3S1 775 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 DDX42Q86XP3 938 aaKnown RBP eCLIP12.24□□□□□ -0.45
RAB5C-208ENST00000551338 NT5DC4Q86YG4 428 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 MREGQ8N565 214 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 SOCS4Q8WXH5 440 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 IFT81Q8WYA0 676 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 SEC14L1Q92503 715 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 DDX27Q96GQ7 796 aaKnown RBP12.24□□□□□ -0.45
RAB5C-208ENST00000551338 ACAP3Q96P50 834 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 PASKQ96RG2 1323 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 TWNKQ96RR1 684 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 GCOM2Q9BZD3 368 aaPredicted RBP12.24□□□□□ -0.45
RAB5C-208ENST00000551338 HMGXB4Q9UGU5 601 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 C2CD2Q9Y426 696 aa12.24□□□□□ -0.45
RAB5C-208ENST00000551338 FAM187AA6NFU0 413 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 CILPO75339 1184 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 PAEPP09466 180 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 DARSP14868 501 aaKnown RBP12.23□□□□□ -0.45
RAB5C-208ENST00000551338 HOXA11P31270 313 aaPredicted RBP12.23□□□□□ -0.45
RAB5C-208ENST00000551338 MAN1A1P33908 653 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 CDH8P55286 799 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 TAS2R40P59535 323 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 BEX3Q00994 111 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 ZNF252P-AS1Q0IIN9 211 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 DHX34Q14147 1143 aaKnown RBP12.23□□□□□ -0.45
RAB5C-208ENST00000551338 TERF2Q15554 542 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 CATSPER4Q7RTX7 472 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 MAATS1Q7Z4T9 603 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 CD302Q8IX05 232 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 WDTC1Q8N5D0 677 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 C12orf50Q8NA57 414 aaPredicted RBP12.23□□□□□ -0.45
RAB5C-208ENST00000551338 TMEM35BQ8NCS4 154 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 FEZF2Q8TBJ5 459 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.23□□□□□ -0.45
RAB5C-208ENST00000551338 CCDC102AQ96A19 550 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 SNX27Q96L92 541 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 OSMRQ99650 979 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 HERPUD2Q9BSE4 406 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 EIF2AQ9BY44 585 aaKnown RBP12.23□□□□□ -0.45
RAB5C-208ENST00000551338 ZNF518BQ9C0D4 1074 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 ELOVL4Q9GZR5 314 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 CXCL16Q9H2A7 254 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 CYP3A43Q9HB55 503 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 ZFYVE28Q9HCC9 887 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 MRPL47Q9HD33 250 aaKnown RBP12.23□□□□□ -0.45
RAB5C-208ENST00000551338 MED4Q9NPJ6 270 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 ITGA11Q9UKX5 1188 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 AGAP1Q9UPQ3 857 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 FAN1Q9Y2M0 1017 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 Q9Y3F1 56 aa12.23□□□□□ -0.45
RAB5C-208ENST00000551338 THSD7BQ9C0I4 1608 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 MYO1FO00160 1098 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 O00370 1275 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 TNPO2O14787 897 aaKnown RBP12.22□□□□□ -0.45
RAB5C-208ENST00000551338 FSCN2O14926 492 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 TLR3O15455 904 aaKnown RBP12.22□□□□□ -0.45
RAB5C-208ENST00000551338 DAPK3O43293 454 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 PSTPIP1O43586 416 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 RARAP10276 462 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms