RNA–Protein interactions for RNA: ENST00000551297.6

TMEM116-214, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-214ENST00000551297 LRRC38Q5VT99 294 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 ALS2CLQ60I27 953 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 JADE1Q6IE81 842 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 SPOPLQ6IQ16 392 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 PLEKHA7Q6IQ23 1121 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 CCNI2Q6ZMN8 369 aaPredicted RBP8.31□□□□□ -1.08
TMEM116-214ENST00000551297 CEP128Q6ZU80 1094 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 RHOT1Q8IXI2 618 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 MREGQ8N565 214 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 C1orf127Q8N9H9 656 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 FAM71BQ8TC56 605 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 CCHCR1Q8TD31 782 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 FNIP1Q8TF40 1166 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 AENQ8WTP8 325 aaKnown RBP8.31□□□□□ -1.08
TMEM116-214ENST00000551297 ZNF606Q8WXB4 792 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 KIF12Q96FN5 646 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 SNX27Q96L92 541 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 KRT12Q99456 494 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 ARID3AQ99856 593 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 FUT8Q9BYC5 575 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 TSPYL1Q9H0U9 437 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 XYLT2Q9H1B5 865 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 UPF3AQ9H1J1 476 aaKnown RBP8.31□□□□□ -1.08
TMEM116-214ENST00000551297 ADAMTS10Q9H324 1103 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 MINDY3Q9H8M7 445 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 GDF3Q9NR23 364 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 ZNF446Q9NWS9 450 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 DDX56Q9NY93 547 aaKnown RBP8.31□□□□□ -1.08
TMEM116-214ENST00000551297 FAM53CQ9NYF3 392 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 PACSIN2Q9UNF0 486 aaPredicted RBP8.31□□□□□ -1.08
TMEM116-214ENST00000551297 PCDHA3Q9Y5H8 950 aa8.31□□□□□ -1.08
TMEM116-214ENST00000551297 TMEM88BA6NKF7 163 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 TMEM110-MUSTN1A8MSY1 372 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 GPR25O00155 361 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 SART1O43290 800 aaKnown RBP8.3□□□□□ -1.08
TMEM116-214ENST00000551297 HSF2BPO75031 334 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 CAND2O75155 1236 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 CILPO75339 1184 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 CABYRO75952 493 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 NPTXRO95502 500 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 GAS8O95995 478 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 IGHA2P01877 340 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 ITGB3P05106 788 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 NFICP08651 508 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 WEE2P0C1S8 567 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 RARBP10826 455 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 CD19P15391 556 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 CD58P19256 250 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 WNT7BP56706 349 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 COPS2P61201 443 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 OSTNP61366 133 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 DR1Q01658 176 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 GUCY2DQ02846 1103 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 LMNB2Q03252 620 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 PTPN11Q06124 597 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-214ENST00000551297 CRHR2Q13324 411 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 SMC1AQ14683 1233 aaKnown RBP8.3□□□□□ -1.08
TMEM116-214ENST00000551297 KIZQ2M2Z5 673 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 WDR72Q3MJ13 1102 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 SGO2Q562F6 1265 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 CFAP58Q5T655 872 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 DCUN1D2Q6PH85 259 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 SCARA5Q6ZMJ2 495 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 CROCCP2Q86T23 111 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 UNC93AQ86WB7 457 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 ERICH1Q86X53 443 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 NIPA2Q8N8Q9 360 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 C12orf50Q8NA57 414 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-214ENST00000551297 PCSK9Q8NBP7 692 aaKnown RBP8.3□□□□□ -1.08
TMEM116-214ENST00000551297 C3orf20Q8ND61 904 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 FEZF2Q8TBJ5 459 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 KAT2BQ92831 832 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 CD101Q93033 1021 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 CYFIP2Q96F07 1278 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 HPDLQ96IR7 371 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 C11orf70Q9BRQ4 267 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 LRRC1Q9BTT6 524 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 FRMD8P1Q9BZ68 369 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-214ENST00000551297 FAM49AQ9H0Q0 323 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-214ENST00000551297 SYNCQ9H7C4 482 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.3□□□□□ -1.08
TMEM116-214ENST00000551297 SLC38A7Q9NVC3 462 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 SETD4Q9NVD3 440 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 DPP3Q9NY33 737 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 CNTN3Q9P232 1028 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 NXF1Q9UBU9 619 aaKnown RBP8.3□□□□□ -1.08
TMEM116-214ENST00000551297 BARX2Q9UMQ3 279 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-214ENST00000551297 COG5Q9UP83 839 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 TRPV2Q9Y5S1 764 aa8.3□□□□□ -1.08
TMEM116-214ENST00000551297 ARHGEF37A1IGU5 675 aa8.29□□□□□ -1.08
TMEM116-214ENST00000551297 GOLGA6BA6NDN3 693 aa8.29□□□□□ -1.08
TMEM116-214ENST00000551297 GOLGA6L10A6NI86 522 aa8.29□□□□□ -1.08
TMEM116-214ENST00000551297 TTLL13PA6NNM8 815 aa8.29□□□□□ -1.08
TMEM116-214ENST00000551297 A6NNZ2 444 aa8.29□□□□□ -1.08
TMEM116-214ENST00000551297 SEPT4O43236 478 aa8.29□□□□□ -1.08
TMEM116-214ENST00000551297 RAD51CO43502 376 aa8.29□□□□□ -1.08
TMEM116-214ENST00000551297 GPR32O75388 356 aa8.29□□□□□ -1.08
TMEM116-214ENST00000551297 ECM2O94769 699 aaPredicted RBP8.29□□□□□ -1.08
TMEM116-214ENST00000551297 SEC31AO94979 1220 aaKnown RBP8.29□□□□□ -1.08
TMEM116-214ENST00000551297 GNRH1P01148 92 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms