RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 CLSTN3Q9BQT9 956 aa17.45■□□□□ 0.38
CHMP1A-209ENST00000550872 TMEM8AQ9HCN3 771 aa17.45■□□□□ 0.38
CHMP1A-209ENST00000550872 GDAP2Q9NXN4 497 aa17.45■□□□□ 0.38
CHMP1A-209ENST00000550872 CLDND1Q9NY35 253 aa17.45■□□□□ 0.38
CHMP1A-209ENST00000550872 MTRRQ9UBK8 725 aa17.45■□□□□ 0.38
CHMP1A-209ENST00000550872 SNX9Q9Y5X1 595 aa17.45■□□□□ 0.38
CHMP1A-209ENST00000550872 BACE2Q9Y5Z0 518 aa17.45■□□□□ 0.38
CHMP1A-209ENST00000550872 LINC01565O15544 149 aa17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 HLA-DRAP01903 254 aa17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 CYP11A1P05108 521 aa17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 ATICP31939 592 aa17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 OR1D2P34982 312 aa17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 PIK3CAP42336 1068 aa17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 MRPL58Q14197 206 aaKnown RBP17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 WSCD1Q658N2 575 aa17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 KRT39Q6A163 491 aa17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 OVOS1Q6IE37 1185 aa17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 ZNF280DQ6N043 979 aa17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 C15orf39Q6ZRI6 1047 aa17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 C11orf57Q6ZUT1 292 aaPredicted RBP17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 PALB2Q86YC2 1186 aa17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 SLC35C1Q96A29 364 aa17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 PABPC5Q96DU9 382 aaKnown RBP17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 DSEQ9UL01 958 aa17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 CDY1Q9Y6F8 540 aa17.44■□□□□ 0.38
CHMP1A-209ENST00000550872 ADAM12O43184 909 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 OAZ2O95190 189 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 MXI1P50539 228 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 ARPP19P56211 112 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 RBM10P98175 930 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 SGSM1Q2NKQ1 1148 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 ZNF699Q32M78 642 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 WDR72Q3MJ13 1102 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 TJAP1Q5JTD0 557 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 RSPO2Q6UXX9 243 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 ENOX1Q8TC92 643 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 SLC22A17Q8WUG5 538 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 HLA-CQ95604 372 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 CNOT6LQ96LI5 555 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 MMS19Q96T76 1030 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 DNAJC25Q9H1X3 360 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 THAP9Q9H5L6 903 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 PRDM6Q9NQX0 595 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 NXF1Q9UBU9 619 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 FBXL5Q9UKA1 691 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 HCFC2Q9Y5Z7 792 aa17.43■□□□□ 0.38
CHMP1A-209ENST00000550872 SYCE3A1L190 88 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 TBC1D4O60343 1298 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 STAU1O95793 577 aaKnown RBP17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 GLUD1P00367 558 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 SRGAP2BP0DMP2 458 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 EPCAMP16422 314 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 CLCN4P51793 760 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 MARSP56192 900 aaKnown RBP17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 TNNC1P63316 161 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 COL19A1Q14993 1142 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 CTC1Q2NKJ3 1217 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 ZNF667Q5HYK9 610 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 DPH6Q7L8W6 267 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 IRF2BP1Q8IU81 584 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 FAM114A1Q8IWE2 563 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 TRIM59Q8IWR1 403 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 THEM5Q8N1Q8 247 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 PDCL2Q8N4E4 241 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 TOP6BLQ8N6T0 577 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 VN1R2Q8NFZ6 395 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 TAS1R2Q8TE23 839 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 TAF4BQ92750 862 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 CASP10Q92851 521 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 XYLT2Q9H1B5 865 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 UBE2ZQ9H832 354 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 MAGEC2Q9UBF1 373 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 L1RE1Q9UN81 338 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 COG5Q9UP83 839 aa17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.42■□□□□ 0.38
CHMP1A-209ENST00000550872 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 GLP2RO95838 553 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 SPATA31D3P0C874 917 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 KCNC3Q14003 757 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 RAB33AQ14088 237 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 SOWAHAQ2M3V2 549 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 CBWD6Q4V339 395 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 CBWD3Q5JTY5 395 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 CBWD5Q5RIA9 395 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 SLC8B1Q6J4K2 584 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 SPATA31D4Q6ZUB0 917 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 TMEM86AQ8N2M4 240 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 CCDC150Q8NCX0 1101 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 FBXL13Q8NEE6 735 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 ATXN2LQ8WWM7 1075 aaKnown RBP17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 ELMO3Q96BJ8 720 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 PI4K2AQ9BTU6 479 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 OXCT2Q9BYC2 517 aaPredicted RBP17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 IMPG2Q9BZV3 1241 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.41■□□□□ 0.382e-11■■■■■ 173.1
CHMP1A-209ENST00000550872 SAMSN1Q9NSI8 373 aaKnown RBP17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 BARX2Q9UMQ3 279 aaPredicted RBP17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 NFE2L3Q9Y4A8 694 aa17.41■□□□□ 0.38
CHMP1A-209ENST00000550872 TRANK1O15050 2925 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 OR6C75A6NL08 312 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms