RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 MYL6P60660 151 aa24.24■■□□□ 1.47
BRF1-216ENST00000550208 YWHAHQ04917 246 aaPredicted RBP24.24■■□□□ 1.47
BRF1-216ENST00000550208 ENPEPQ07075 957 aa24.24■■□□□ 1.47
BRF1-216ENST00000550208 MYO1EQ12965 1108 aa24.24■■□□□ 1.47
BRF1-216ENST00000550208 RAB33AQ14088 237 aa24.24■■□□□ 1.47
BRF1-216ENST00000550208 WSCD1Q658N2 575 aa24.24■■□□□ 1.47
BRF1-216ENST00000550208 ANKRD54Q6NXT1 300 aa24.24■■□□□ 1.47
BRF1-216ENST00000550208 MSLNLQ96KJ4 702 aa24.24■■□□□ 1.47
BRF1-216ENST00000550208 GDAP2Q9NXN4 497 aa24.24■■□□□ 1.47
BRF1-216ENST00000550208 SNX9Q9Y5X1 595 aa24.24■■□□□ 1.47
BRF1-216ENST00000550208 EYSQ5T1H1 3165 aa24.23■■□□□ 1.47
BRF1-216ENST00000550208 GLUD1P00367 558 aa24.23■■□□□ 1.47
BRF1-216ENST00000550208 LEXMQ3ZCV2 418 aa24.23■■□□□ 1.47
BRF1-216ENST00000550208 ZACNQ401N2 412 aa24.23■■□□□ 1.47
BRF1-216ENST00000550208 OVOS1Q6IE37 1185 aa24.23■■□□□ 1.47
BRF1-216ENST00000550208 ZNF280DQ6N043 979 aa24.23■■□□□ 1.47
BRF1-216ENST00000550208 SYCE2Q6PIF2 218 aa24.23■■□□□ 1.47
BRF1-216ENST00000550208 C15orf39Q6ZRI6 1047 aa24.23■■□□□ 1.47
BRF1-216ENST00000550208 C12orf76Q8N812 135 aaPredicted RBP24.23■■□□□ 1.47
BRF1-216ENST00000550208 APOL5Q9BWW9 433 aa24.23■■□□□ 1.47
BRF1-216ENST00000550208 MMRN2Q9H8L6 949 aa24.23■■□□□ 1.47
BRF1-216ENST00000550208 ARHGEF37A1IGU5 675 aa24.22■■□□□ 1.47
BRF1-216ENST00000550208 SRGAP2BP0DMP2 458 aa24.22■■□□□ 1.47
BRF1-216ENST00000550208 NCOA4Q13772 614 aa24.22■■□□□ 1.47
BRF1-216ENST00000550208 SLC8B1Q6J4K2 584 aa24.22■■□□□ 1.47
BRF1-216ENST00000550208 CAVIN1Q6NZI2 390 aaKnown RBP24.22■■□□□ 1.47
BRF1-216ENST00000550208 FRMD5Q7Z6J6 570 aa24.22■■□□□ 1.47
BRF1-216ENST00000550208 METTL23Q86XA0 190 aa24.22■■□□□ 1.47
BRF1-216ENST00000550208 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.22■■□□□ 1.47
BRF1-216ENST00000550208 ELMO3Q96BJ8 720 aa24.22■■□□□ 1.47
BRF1-216ENST00000550208 ARMCX3Q9UH62 379 aaPredicted RBP24.22■■□□□ 1.47
BRF1-216ENST00000550208 CD207Q9UJ71 328 aa24.22■■□□□ 1.47
BRF1-216ENST00000550208 DSEQ9UL01 958 aa24.22■■□□□ 1.47
BRF1-216ENST00000550208 L1RE1Q9UN81 338 aa24.22■■□□□ 1.47
BRF1-216ENST00000550208 HUS1O60921 280 aa24.21■■□□□ 1.47
BRF1-216ENST00000550208 CCDC40Q4G0X9 1142 aa24.21■■□□□ 1.47
BRF1-216ENST00000550208 SASS6Q6UVJ0 657 aa24.21■■□□□ 1.47
BRF1-216ENST00000550208 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.21■■□□□ 1.47
BRF1-216ENST00000550208 PDCL2Q8N4E4 241 aa24.21■■□□□ 1.47
BRF1-216ENST00000550208 ATXN2LQ8WWM7 1075 aaKnown RBP24.21■■□□□ 1.47
BRF1-216ENST00000550208 RTP3Q9BQQ7 232 aa24.21■■□□□ 1.47
BRF1-216ENST00000550208 XYLT2Q9H1B5 865 aa24.21■■□□□ 1.47
BRF1-216ENST00000550208 METTL14Q9HCE5 456 aaKnown RBP24.21■■□□□ 1.47
BRF1-216ENST00000550208 MAN1C1Q9NR34 630 aa24.21■■□□□ 1.47
BRF1-216ENST00000550208 PLXNA3P51805 1871 aa24.21■■□□□ 1.47
BRF1-216ENST00000550208 PRUNE2Q8WUY3 3088 aa24.2■■□□□ 1.46
BRF1-216ENST00000550208 C1RP00736 705 aa24.2■■□□□ 1.46
BRF1-216ENST00000550208 HLA-DRAP01903 254 aa24.2■■□□□ 1.46
BRF1-216ENST00000550208 ATICP31939 592 aa24.2■■□□□ 1.46
BRF1-216ENST00000550208 GTF2H1P32780 548 aa24.2■■□□□ 1.46
BRF1-216ENST00000550208 MRPS5P82675 430 aaKnown RBP24.2■■□□□ 1.46
BRF1-216ENST00000550208 ROR1Q01973 937 aa24.2■■□□□ 1.46
BRF1-216ENST00000550208 SOWAHAQ2M3V2 549 aa24.2■■□□□ 1.46
BRF1-216ENST00000550208 WDR72Q3MJ13 1102 aa24.2■■□□□ 1.46
BRF1-216ENST00000550208 TCERG1LQ5VWI1 586 aa24.2■■□□□ 1.46
BRF1-216ENST00000550208 TOP6BLQ8N6T0 577 aa24.2■■□□□ 1.46
BRF1-216ENST00000550208 KREMEN2Q8NCW0 462 aa24.2■■□□□ 1.46
BRF1-216ENST00000550208 TMEM209Q96SK2 561 aa24.2■■□□□ 1.46
BRF1-216ENST00000550208 S1PR5Q9H228 398 aa24.2■■□□□ 1.46
BRF1-216ENST00000550208 TMEM8AQ9HCN3 771 aa24.2■■□□□ 1.46
BRF1-216ENST00000550208 DACH1Q9UI36 760 aa24.2■■□□□ 1.46
BRF1-216ENST00000550208 OR6C75A6NL08 312 aa24.19■■□□□ 1.46
BRF1-216ENST00000550208 FGFR1OPO95684 399 aaKnown RBP24.19■■□□□ 1.46
BRF1-216ENST00000550208 STAU1O95793 577 aaKnown RBP24.19■■□□□ 1.46
BRF1-216ENST00000550208 OR4Q2P0C623 313 aa24.19■■□□□ 1.46
BRF1-216ENST00000550208 HOXB8P17481 243 aaPredicted RBP24.19■■□□□ 1.46
BRF1-216ENST00000550208 ERCC5P28715 1186 aaPredicted RBP24.19■■□□□ 1.46
BRF1-216ENST00000550208 KCNQ1P51787 676 aa24.19■■□□□ 1.46
BRF1-216ENST00000550208 SGSM1Q2NKQ1 1148 aa24.19■■□□□ 1.46
BRF1-216ENST00000550208 DCAF17Q5H9S7 520 aaPredicted RBP24.19■■□□□ 1.46
BRF1-216ENST00000550208 LIMS2Q7Z4I7 341 aa24.19■■□□□ 1.46
BRF1-216ENST00000550208 OSTM1Q86WC4 334 aa24.19■■□□□ 1.46
BRF1-216ENST00000550208 THEM5Q8N1Q8 247 aa24.19■■□□□ 1.46
BRF1-216ENST00000550208 ZNF461Q8TAF7 563 aa24.19■■□□□ 1.46
BRF1-216ENST00000550208 FEZF2Q8TBJ5 459 aa24.19■■□□□ 1.46
BRF1-216ENST00000550208 SYAP1Q96A49 352 aaPredicted RBP24.19■■□□□ 1.46
BRF1-216ENST00000550208 DZANK1Q9NVP4 752 aa24.19■■□□□ 1.46
BRF1-216ENST00000550208 NXF1Q9UBU9 619 aaKnown RBP24.19■■□□□ 1.46
BRF1-216ENST00000550208 POLIQ9UNA4 740 aa24.19■■□□□ 1.46
BRF1-216ENST00000550208 WDR27A2RRH5 827 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 STX10O60499 249 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 LRRN2O75325 713 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 ABLIM3O94929 683 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 PTMSP20962 102 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 AAK1Q2M2I8 961 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 KLHL40Q2TBA0 621 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 RARS2Q5T160 578 aaKnown RBP24.18■■□□□ 1.46
BRF1-216ENST00000550208 KRT39Q6A163 491 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 DPH6Q7L8W6 267 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 OR10T2Q8NGX3 314 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 TAS1R2Q8TE23 839 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 HDAC7Q8WUI4 952 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 SLC35C1Q96A29 364 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 ASB2Q96Q27 587 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 MMS19Q96T76 1030 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 OXCT2Q9BYC2 517 aaPredicted RBP24.18■■□□□ 1.46
BRF1-216ENST00000550208 PLEKHA4Q9H4M7 779 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.18■■□□□ 1.469e-7■■■■■ 91.3
BRF1-216ENST00000550208 FBXW11Q9UKB1 542 aa24.18■■□□□ 1.46
BRF1-216ENST00000550208 GRXCR2A6NFK2 248 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms