RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 L1TD1Q5T7N2 865 aaKnown RBP17.25■□□□□ 0.35
COX6A1-203ENST00000550009 STKLD1Q8NE28 680 aa17.25■□□□□ 0.35
COX6A1-203ENST00000550009 SNX21Q969T3 373 aa17.25■□□□□ 0.35
COX6A1-203ENST00000550009 BORCS6Q96GS4 357 aa17.25■□□□□ 0.35
COX6A1-203ENST00000550009 LRRC3Q9BY71 257 aa17.25■□□□□ 0.35
COX6A1-203ENST00000550009 ZSCAN16Q9H4T2 348 aaPredicted RBP17.25■□□□□ 0.35
COX6A1-203ENST00000550009 ZNF334Q9HCZ1 680 aaPredicted RBP17.25■□□□□ 0.35
COX6A1-203ENST00000550009 ARHGEF3Q9NR81 526 aa17.25■□□□□ 0.35
COX6A1-203ENST00000550009 SLC2A4RGQ9NR83 387 aa17.25■□□□□ 0.35
COX6A1-203ENST00000550009 PANK4Q9NVE7 773 aa17.25■□□□□ 0.35
COX6A1-203ENST00000550009 DPP3Q9NY33 737 aa17.25■□□□□ 0.35
COX6A1-203ENST00000550009 AFF4Q9UHB7 1163 aaKnown RBP17.25■□□□□ 0.35
COX6A1-203ENST00000550009 YIPF1Q9Y548 306 aa17.25■□□□□ 0.35
COX6A1-203ENST00000550009 PTPRDP23468 1912 aa17.25■□□□□ 0.35
COX6A1-203ENST00000550009 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.24■□□□□ 0.35
COX6A1-203ENST00000550009 MTMR11A4FU01 709 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 HCRTO43612 131 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 MYL4P12829 197 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 FAM78AQ5JUQ0 283 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 TPGS2Q68CL5 300 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 LMBRD2Q68DH5 695 aaPredicted RBP17.24■□□□□ 0.35
COX6A1-203ENST00000550009 OVOS1Q6IE37 1185 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 ASCL5Q7RTU5 278 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 FRMD5Q7Z6J6 570 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 LRRTM3Q86VH5 581 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 CCDC105Q8IYK2 499 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 DTWD2Q8NBA8 298 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 NOC3LQ8WTT2 800 aaKnown RBP17.24■□□□□ 0.35
COX6A1-203ENST00000550009 NXPE3Q969Y0 559 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 DHX58Q96C10 678 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 RSPRY1Q96DX4 576 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 DLGAP2Q9P1A6 1054 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 KCNH3Q9ULD8 1083 aa17.24■□□□□ 0.35
COX6A1-203ENST00000550009 PTPRJQ12913 1337 aa17.23■□□□□ 0.35
COX6A1-203ENST00000550009 F5P12259 2224 aa17.23■□□□□ 0.35
COX6A1-203ENST00000550009 TXLNAP40222 546 aa17.23■□□□□ 0.35
COX6A1-203ENST00000550009 VIPR2P41587 438 aa17.23■□□□□ 0.35
COX6A1-203ENST00000550009 ANGPT1Q15389 498 aa17.23■□□□□ 0.35
COX6A1-203ENST00000550009 TEAD2Q15562 447 aa17.23■□□□□ 0.35
COX6A1-203ENST00000550009 WSCD1Q658N2 575 aa17.23■□□□□ 0.35
COX6A1-203ENST00000550009 CCDC73Q6ZRK6 1079 aa17.23■□□□□ 0.35
COX6A1-203ENST00000550009 TMC8Q8IU68 726 aa17.23■□□□□ 0.35
COX6A1-203ENST00000550009 GRAMD1CQ8IYS0 662 aa17.23■□□□□ 0.35
COX6A1-203ENST00000550009 SHKBP1Q8TBC3 707 aa17.23■□□□□ 0.35
COX6A1-203ENST00000550009 PRRX2Q99811 253 aa17.23■□□□□ 0.35
COX6A1-203ENST00000550009 LPIN3Q9BQK8 851 aa17.23■□□□□ 0.35
COX6A1-203ENST00000550009 TMLHEQ9NVH6 421 aa17.23■□□□□ 0.35
COX6A1-203ENST00000550009 DAXXQ9UER7 740 aaPredicted RBP17.23■□□□□ 0.35
COX6A1-203ENST00000550009 ZFP37Q9Y6Q3 630 aaPredicted RBP17.23■□□□□ 0.35
COX6A1-203ENST00000550009 MORC2Q9Y6X9 1032 aaPredicted RBP17.23■□□□□ 0.35
COX6A1-203ENST00000550009 GAP43P17677 238 aa17.22■□□□□ 0.35
COX6A1-203ENST00000550009 KYAT1Q16773 422 aa17.22■□□□□ 0.35
COX6A1-203ENST00000550009 SLFN12LQ6IEE8 588 aa17.22■□□□□ 0.35
COX6A1-203ENST00000550009 CENPPQ6IPU0 288 aa17.22■□□□□ 0.35
COX6A1-203ENST00000550009 MTSS1LQ765P7 747 aa17.22■□□□□ 0.35
COX6A1-203ENST00000550009 USP37Q86T82 979 aa17.22■□□□□ 0.35
COX6A1-203ENST00000550009 CXorf38Q8TB03 319 aa17.22■□□□□ 0.35
COX6A1-203ENST00000550009 ACCSQ96QU6 501 aa17.22■□□□□ 0.35
COX6A1-203ENST00000550009 PYM1Q9BRP8 204 aaKnown RBP17.22■□□□□ 0.35
COX6A1-203ENST00000550009 PDE11AQ9HCR9 933 aa17.22■□□□□ 0.35
COX6A1-203ENST00000550009 AVENQ9NQS1 362 aaPredicted RBP17.22■□□□□ 0.35
COX6A1-203ENST00000550009 CYB561D2O14569 222 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 F13A1P00488 732 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 ZSCAN22P10073 491 aaPredicted RBP17.21■□□□□ 0.35
COX6A1-203ENST00000550009 TYMPP19971 482 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 TFAMQ00059 246 aaKnown RBP17.21■□□□□ 0.35
COX6A1-203ENST00000550009 GPR17Q13304 367 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 SLC39A12Q504Y0 691 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 SLC44A4Q53GD3 710 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 VITQ6UXI7 678 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 PDZD4Q76G19 769 aaPredicted RBP17.21■□□□□ 0.35
COX6A1-203ENST00000550009 C1orf127Q8N9H9 656 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 HVCN1Q96D96 273 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 ZNF512Q96ME7 567 aaPredicted RBP17.21■□□□□ 0.35
COX6A1-203ENST00000550009 ASB16Q96NS5 453 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 BLZF1Q9H2G9 400 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 ASB7Q9H672 318 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 OLFML3Q9NRN5 406 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 HEBP1Q9NRV9 189 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 KBTBD4Q9NVX7 518 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 SEL1LQ9UBV2 794 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 DERAQ9Y315 318 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 C2CD2Q9Y426 696 aa17.21■□□□□ 0.35
COX6A1-203ENST00000550009 RIF1Q5UIP0 2472 aaKnown RBP17.21■□□□□ 0.34
COX6A1-203ENST00000550009 FAM186AA6NE01 2351 aa17.2■□□□□ 0.34
COX6A1-203ENST00000550009 A0A1W2PRU2 124 aa17.2■□□□□ 0.34
COX6A1-203ENST00000550009 OR6C75A6NL08 312 aa17.2■□□□□ 0.34
COX6A1-203ENST00000550009 XPOTO43592 962 aaKnown RBP17.2■□□□□ 0.34
COX6A1-203ENST00000550009 GFRA3O60609 400 aa17.2■□□□□ 0.34
COX6A1-203ENST00000550009 PPP6R2O75170 966 aa17.2■□□□□ 0.34
COX6A1-203ENST00000550009 ITGB3P05106 788 aa17.2■□□□□ 0.34
COX6A1-203ENST00000550009 CYP11A1P05108 521 aa17.2■□□□□ 0.34
COX6A1-203ENST00000550009 ODC1P11926 461 aa17.2■□□□□ 0.34
COX6A1-203ENST00000550009 POLR2BP30876 1174 aaKnown RBP17.2■□□□□ 0.34
COX6A1-203ENST00000550009 GPR15P49685 360 aa17.2■□□□□ 0.34
COX6A1-203ENST00000550009 EPHA5P54756 1037 aa17.2■□□□□ 0.34
COX6A1-203ENST00000550009 STARD6P59095 220 aa17.2■□□□□ 0.34
COX6A1-203ENST00000550009 MLF2Q15773 248 aaPredicted RBP17.2■□□□□ 0.34
COX6A1-203ENST00000550009 GAREM2Q75VX8 874 aa17.2■□□□□ 0.34
COX6A1-203ENST00000550009 RTL10Q7L3V2 364 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms