RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 CCDC105Q8IYK2 499 aa17.67■□□□□ 0.42
VPS29-207ENST00000549970 NOC3LQ8WTT2 800 aaKnown RBP17.67■□□□□ 0.42
VPS29-207ENST00000549970 DHX58Q96C10 678 aa17.67■□□□□ 0.42
VPS29-207ENST00000549970 TMEM209Q96SK2 561 aa17.67■□□□□ 0.42
VPS29-207ENST00000549970 TNMDQ9H2S6 317 aa17.67■□□□□ 0.42
VPS29-207ENST00000549970 CRISPLD1Q9H336 500 aa17.67■□□□□ 0.42
VPS29-207ENST00000549970 CUTAO60888 179 aa17.66■□□□□ 0.42
VPS29-207ENST00000549970 ZSCAN22P10073 491 aaPredicted RBP17.66■□□□□ 0.42
VPS29-207ENST00000549970 MYL4P12829 197 aa17.66■□□□□ 0.42
VPS29-207ENST00000549970 PAX3P23760 479 aa17.66■□□□□ 0.42
VPS29-207ENST00000549970 TAF6P49848 677 aa17.66■□□□□ 0.42
VPS29-207ENST00000549970 WNT7BP56706 349 aa17.66■□□□□ 0.42
VPS29-207ENST00000549970 POU5F1Q01860 360 aaKnown RBP17.66■□□□□ 0.42
VPS29-207ENST00000549970 GPR17Q13304 367 aa17.66■□□□□ 0.42
VPS29-207ENST00000549970 SNW1Q13573 536 aaKnown RBP17.66■□□□□ 0.42
VPS29-207ENST00000549970 MYBPC2Q14324 1141 aa17.66■□□□□ 0.42
VPS29-207ENST00000549970 E2F4Q16254 413 aa17.66■□□□□ 0.42
VPS29-207ENST00000549970 ARMCX5Q6P1M9 558 aa17.66■□□□□ 0.42
VPS29-207ENST00000549970 DTWD2Q8NBA8 298 aa17.66■□□□□ 0.42
VPS29-207ENST00000549970 SPRYD3Q8NCJ5 442 aa17.66■□□□□ 0.42
VPS29-207ENST00000549970 PYM1Q9BRP8 204 aaKnown RBP17.66■□□□□ 0.42
VPS29-207ENST00000549970 CBWD1Q9BRT8 395 aa17.66■□□□□ 0.42
VPS29-207ENST00000549970 ASAH2Q9NR71 780 aa17.66■□□□□ 0.42
VPS29-207ENST00000549970 TCHHQ07283 1943 aa17.66■□□□□ 0.42
VPS29-207ENST00000549970 MTMR11A4FU01 709 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 GOLGA8IPA6NC78 632 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 GOLGA8JA6NMD2 632 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 CYB561D2O14569 222 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 ECI2O75521 394 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 F13A1P00488 732 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 DCNP07585 359 aaKnown RBP17.65■□□□□ 0.42
VPS29-207ENST00000549970 GJA1P17302 382 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 GARTP22102 1010 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 CDR1P51861 262 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 TFAMQ00059 246 aaKnown RBP17.65■□□□□ 0.42
VPS29-207ENST00000549970 PLD1Q13393 1074 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 TANGO2Q6ICL3 276 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 PHLDB3Q6NSJ2 640 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 SHC4Q6S5L8 630 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 BRSK2Q8IWQ3 736 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 ATAD1Q8NBU5 361 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 OR10T2Q8NGX3 314 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 HPS3Q969F9 1004 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 PLA2G2FQ9BZM2 168 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 FOXQ1Q9C009 403 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 LRRC27Q9C0I9 530 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 PCIF1Q9H4Z3 704 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 TMEM206Q9H813 350 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 KBTBD4Q9NVX7 518 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 RBAKQ9NYW8 714 aaPredicted RBP17.65■□□□□ 0.42
VPS29-207ENST00000549970 SLC27A5Q9Y2P5 690 aa17.65■□□□□ 0.42
VPS29-207ENST00000549970 COL4A3Q01955 1670 aa17.64■□□□□ 0.42
VPS29-207ENST00000549970 LDHAP00338 332 aaKnown RBP17.64■□□□□ 0.41
VPS29-207ENST00000549970 CYP11A1P05108 521 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 ALDH1A3P47895 512 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 ASIC1P78348 528 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 PFKPQ01813 784 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 PKP1Q13835 747 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 ANGPT1Q15389 498 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 MLF2Q15773 248 aaPredicted RBP17.64■□□□□ 0.41
VPS29-207ENST00000549970 FAM78AQ5JUQ0 283 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 CENPPQ6IPU0 288 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 METTL23Q86XA0 190 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 NT5DC4Q86YG4 428 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 TTC9BQ8N6N2 239 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 IQUBQ8NA54 791 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 LEMD2Q8NC56 503 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 GLIS3Q8NEA6 775 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 SHDQ96IW2 340 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 TRIM9Q9C026 710 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 DNAJC25Q9H1X3 360 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 CUEDC2Q9H467 287 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 DSEQ9UL01 958 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 SIT1Q9Y3P8 196 aa17.64■□□□□ 0.41
VPS29-207ENST00000549970 EXTL3O43909 919 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 MOSPD3O75425 235 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 SOAT2O75908 522 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 MICAL2O94851 1124 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 PDIA4P13667 645 aaKnown RBP17.63■□□□□ 0.41
VPS29-207ENST00000549970 FCARP24071 287 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 POLR2BP30876 1174 aaKnown RBP17.63■□□□□ 0.41
VPS29-207ENST00000549970 EPHB3P54753 998 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 EPHA5P54756 1037 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 STARD6P59095 220 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 AMPD3Q01432 767 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 GRM2Q14416 872 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 TEAD2Q15562 447 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 SV2CQ496J9 727 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 SLC39A12Q504Y0 691 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 SLC44A4Q53GD3 710 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 WSCD1Q658N2 575 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 STXBP4Q6ZWJ1 553 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 KCNG4Q8TDN1 519 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 ELSPBP1Q96BH3 223 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 FAM84AQ96KN4 292 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 ZSWIM3Q96MP5 696 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 ZNF560Q96MR9 790 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 ASB16Q96NS5 453 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 ZFP14Q9HCL3 533 aa17.63■□□□□ 0.41
VPS29-207ENST00000549970 KPNA7A9QM74 516 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms