RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 C3orf36Q3SXR2 165 aa5.59□□□□□ -1.51
CCDC38-208ENST00000549876 CLNKQ7Z7G1 428 aa5.59□□□□□ -1.51
CCDC38-208ENST00000549876 AMIGO2Q86SJ2 522 aa5.59□□□□□ -1.51
CCDC38-208ENST00000549876 HDAC10Q969S8 669 aa5.59□□□□□ -1.51
CCDC38-208ENST00000549876 TMX3Q96JJ7 454 aa5.59□□□□□ -1.51
CCDC38-208ENST00000549876 PGBD1Q96JS3 809 aa5.59□□□□□ -1.51
CCDC38-208ENST00000549876 MRGPRX4Q96LA9 322 aa5.59□□□□□ -1.51
CCDC38-208ENST00000549876 TDP1Q9NUW8 608 aa5.59□□□□□ -1.51
CCDC38-208ENST00000549876 SAP30BPQ9UHR5 308 aaKnown RBP5.59□□□□□ -1.51
CCDC38-208ENST00000549876 ZNF804BA4D1E1 1349 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 WDR27A2RRH5 827 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 KLHL33A6NCF5 533 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 LINC00473A8K010 186 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 GABRDO14764 452 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 SGTAO43765 313 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 HAUS5O94927 633 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 MYBL2P10244 700 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 CDK11BP21127 795 aaKnown RBP5.58□□□□□ -1.52
CCDC38-208ENST00000549876 TFF2Q03403 129 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 FPGSQ05932 587 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 FLYWCH1Q4VC44 716 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 PABPC1LQ4VXU2 614 aaKnown RBP5.58□□□□□ -1.52
CCDC38-208ENST00000549876 UTP14CQ5TAP6 766 aaKnown RBP5.58□□□□□ -1.52
CCDC38-208ENST00000549876 MIGA2Q7L4E1 593 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 RSPH3Q86UC2 560 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 IL17RDQ8NFM7 739 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 MYCBPAPQ8TBZ2 947 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 COA7Q96BR5 231 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 NEU2Q9Y3R4 380 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 PCDHB1Q9Y5F3 818 aa5.58□□□□□ -1.52
CCDC38-208ENST00000549876 CCDC154A6NI56 674 aa5.57□□□□□ -1.52
CCDC38-208ENST00000549876 AGFG2O95081 481 aa5.57□□□□□ -1.52
CCDC38-208ENST00000549876 MTHFD1P11586 935 aaKnown RBP5.57□□□□□ -1.52
CCDC38-208ENST00000549876 SLC16A1P53985 500 aa5.57□□□□□ -1.52
CCDC38-208ENST00000549876 KRT85P78386 507 aa5.57□□□□□ -1.52
CCDC38-208ENST00000549876 EIF2B5Q13144 721 aaKnown RBP5.57□□□□□ -1.52
CCDC38-208ENST00000549876 DYRK1AQ13627 763 aa5.57□□□□□ -1.52
CCDC38-208ENST00000549876 ATP2B3Q16720 1220 aa5.57□□□□□ -1.52
CCDC38-208ENST00000549876 CD300EQ496F6 205 aaPredicted RBP5.57□□□□□ -1.52
CCDC38-208ENST00000549876 C11orf87Q6NUJ2 197 aa5.57□□□□□ -1.52
CCDC38-208ENST00000549876 TOR1AIP2Q8NFQ8 470 aa5.57□□□□□ -1.52
CCDC38-208ENST00000549876 TEKT5Q96M29 485 aa5.57□□□□□ -1.52
CCDC38-208ENST00000549876 SERPINB13Q9UIV8 391 aa5.57□□□□□ -1.52
CCDC38-208ENST00000549876 LINC01548A6NM66 108 aa5.56□□□□□ -1.52
CCDC38-208ENST00000549876 KCNAB3O43448 404 aa5.56□□□□□ -1.52
CCDC38-208ENST00000549876 XPOTO43592 962 aaKnown RBP5.56□□□□□ -1.52
CCDC38-208ENST00000549876 KATNA1O75449 491 aa5.56□□□□□ -1.52
CCDC38-208ENST00000549876 CHRM2P08172 466 aa5.56□□□□□ -1.52
CCDC38-208ENST00000549876 EVA1CP58658 441 aa5.56□□□□□ -1.52
CCDC38-208ENST00000549876 ITKQ08881 620 aa5.56□□□□□ -1.52
CCDC38-208ENST00000549876 ODF1Q14990 250 aa5.56□□□□□ -1.52
CCDC38-208ENST00000549876 LLGL1Q15334 1064 aa5.56□□□□□ -1.52
CCDC38-208ENST00000549876 RNF187Q5TA31 235 aaPredicted RBP5.56□□□□□ -1.52
CCDC38-208ENST00000549876 TMPRSS9Q7Z410 1059 aa5.56□□□□□ -1.52
CCDC38-208ENST00000549876 VGLL2Q8N8G2 317 aa5.56□□□□□ -1.52
CCDC38-208ENST00000549876 PRPF38AQ8NAV1 312 aaKnown RBP5.56□□□□□ -1.52
CCDC38-208ENST00000549876 SEMA6DQ8NFY4 1073 aa5.56□□□□□ -1.52
CCDC38-208ENST00000549876 KAT5Q92993 513 aa5.56□□□□□ -1.52
CCDC38-208ENST00000549876 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.56□□□□□ -1.52
CCDC38-208ENST00000549876 SLC45A2Q9UMX9 530 aa5.56□□□□□ -1.52
CCDC38-208ENST00000549876 SHTN1A0MZ66 631 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 VWC2LB2RUY7 222 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 IKBKBO14920 756 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 TP73O15350 636 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 SLC43A1O75387 559 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 SUN1O94901 812 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 ANXA11P50995 505 aaKnown RBP5.55□□□□□ -1.52
CCDC38-208ENST00000549876 HNRNPMP52272 730 aaKnown RBP eCLIP5.55□□□□□ -1.52
CCDC38-208ENST00000549876 KIF23Q02241 960 aaPredicted RBP5.55□□□□□ -1.52
CCDC38-208ENST00000549876 TLE1Q04724 770 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 MTX3Q5HYI7 312 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 ADGRG5Q8IZF4 528 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 LRIG1Q96JA1 1093 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 CLPTM1LQ96KA5 538 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 KLHL32Q96NJ5 620 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 HAPLN3Q96S86 360 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 JKAMPQ9P055 326 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 ST3GAL5Q9UNP4 418 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 CDYLQ9Y232 598 aa5.55□□□□□ -1.52
CCDC38-208ENST00000549876 TNKSO95271 1327 aa5.54□□□□□ -1.52
CCDC38-208ENST00000549876 WASHC2CQ9Y4E1 1318 aa5.54□□□□□ -1.52
CCDC38-208ENST00000549876 GCOM1H8Y6P7 765 aaPredicted RBP5.54□□□□□ -1.52
CCDC38-208ENST00000549876 LATS1O95835 1130 aa5.54□□□□□ -1.52
CCDC38-208ENST00000549876 PPP3CBP16298 524 aa5.54□□□□□ -1.52
CCDC38-208ENST00000549876 DSC2Q02487 901 aa5.54□□□□□ -1.52
CCDC38-208ENST00000549876 SLC10A2Q12908 348 aaPredicted RBP5.54□□□□□ -1.52
CCDC38-208ENST00000549876 FAM50AQ14320 339 aaKnown RBP5.54□□□□□ -1.52
CCDC38-208ENST00000549876 RAB39AQ14964 217 aa5.54□□□□□ -1.52
CCDC38-208ENST00000549876 ZNF782Q6ZMW2 699 aaPredicted RBP5.54□□□□□ -1.52
CCDC38-208ENST00000549876 RASAL3Q86YV0 1011 aa5.54□□□□□ -1.52
CCDC38-208ENST00000549876 TMIEQ8NEW7 156 aa5.54□□□□□ -1.52
CCDC38-208ENST00000549876 CALCOCO1Q9P1Z2 691 aa5.54□□□□□ -1.52
CCDC38-208ENST00000549876 CD1AP06126 327 aa5.53□□□□□ -1.52
CCDC38-208ENST00000549876 PRR35P0CG20 571 aa5.53□□□□□ -1.52
CCDC38-208ENST00000549876 NXPH1P58417 271 aa5.53□□□□□ -1.52
CCDC38-208ENST00000549876 MC2RQ01718 297 aa5.53□□□□□ -1.52
CCDC38-208ENST00000549876 ZNF844Q08AG5 666 aa5.53□□□□□ -1.52
CCDC38-208ENST00000549876 HLXQ14774 488 aaPredicted RBP5.53□□□□□ -1.52
CCDC38-208ENST00000549876 ZNF626Q68DY1 528 aa5.53□□□□□ -1.52
CCDC38-208ENST00000549876 ZNF365Q70YC5 407 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms