RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 CEP72Q9P209 647 aa20.16■□□□□ 0.82
CHMP1A-207ENST00000549328 HSFX1Q9UBD0 423 aa20.16■□□□□ 0.82
CHMP1A-207ENST00000549328 RCOR1Q9UKL0 485 aa20.16■□□□□ 0.82
CHMP1A-207ENST00000549328 PCDHA7Q9UN72 937 aa20.16■□□□□ 0.82
CHMP1A-207ENST00000549328 POLR2DO15514 142 aaKnown RBP20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 EXTL3O43909 919 aa20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 PNPLA4P41247 253 aa20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 EPHA5P54756 1037 aa20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 PLD1Q13393 1074 aa20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 PKP1Q13835 747 aa20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 METTL23Q86XA0 190 aa20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 CACTINQ8WUQ7 758 aaKnown RBP20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 ING5Q8WYH8 240 aa20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 SAAL1Q96ER3 474 aa20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 MCRS1Q96EZ8 462 aa20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 BORCS6Q96GS4 357 aa20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 PYM1Q9BRP8 204 aaKnown RBP20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 CBWD1Q9BRT8 395 aa20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 FAM13BQ9NYF5 915 aa20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 RBAKQ9NYW8 714 aaPredicted RBP20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 SCN1AP35498 2009 aa20.15■□□□□ 0.82
CHMP1A-207ENST00000549328 KPNA7A9QM74 516 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 CYB561D2O14569 222 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 EIF3DO15371 548 aaKnown RBP eCLIP20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 ECI2O75521 394 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 VNN2O95498 520 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 OR4Q2P0C623 313 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 GPC5P78333 572 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 ASIC1P78348 528 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 DUSP4Q13115 394 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 SV2CQ496J9 727 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 RESP18Q5W5W9 173 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 CENPPQ6IPU0 288 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 PHLDB3Q6NSJ2 640 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 PDZD4Q76G19 769 aaPredicted RBP20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 SPRYD3Q8NCJ5 442 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 ZSWIM2Q8NEG5 633 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 ST13P5Q8NFI4 369 aaPredicted RBP20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 ZNF560Q96MR9 790 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 PGLYRP2Q96PD5 576 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 ARHGEF3Q9NR81 526 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 CA14Q9ULX7 337 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 YIPF1Q9Y548 306 aa20.14■□□□□ 0.81
CHMP1A-207ENST00000549328 PI15O43692 258 aa20.13■□□□□ 0.81
CHMP1A-207ENST00000549328 CEBPBP17676 345 aa20.13■□□□□ 0.81
CHMP1A-207ENST00000549328 TFAMQ00059 246 aaKnown RBP20.13■□□□□ 0.81
CHMP1A-207ENST00000549328 DNM1Q05193 864 aaKnown RBP20.13■□□□□ 0.81
CHMP1A-207ENST00000549328 EPM2AIP1Q7L775 607 aaPredicted RBP20.13■□□□□ 0.81
CHMP1A-207ENST00000549328 ALYREFQ86V81 257 aaKnown RBP20.13■□□□□ 0.81
CHMP1A-207ENST00000549328 THEM5Q8N1Q8 247 aa20.13■□□□□ 0.81
CHMP1A-207ENST00000549328 GPD1LQ8N335 351 aa20.13■□□□□ 0.81
CHMP1A-207ENST00000549328 ZNF507Q8TCN5 953 aa20.13■□□□□ 0.81
CHMP1A-207ENST00000549328 SHDQ96IW2 340 aa20.13■□□□□ 0.81
CHMP1A-207ENST00000549328 CRISPLD1Q9H336 500 aa20.13■□□□□ 0.81
CHMP1A-207ENST00000549328 PCIF1Q9H4Z3 704 aa20.13■□□□□ 0.81
CHMP1A-207ENST00000549328 ASAH2Q9NR71 780 aa20.13■□□□□ 0.81
CHMP1A-207ENST00000549328 ASB3Q9Y575 518 aa20.13■□□□□ 0.81
CHMP1A-207ENST00000549328 MTMR11A4FU01 709 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 GOLGA8IPA6NC78 632 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 GOLGA8JA6NMD2 632 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 STK25O00506 426 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 HOXD13P35453 343 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 CCR2P41597 374 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 ALDH1A3P47895 512 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 MRE11P49959 708 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 EPHB3P54753 998 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 WNT7BP56706 349 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 PFKPQ01813 784 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 EHHADHQ08426 723 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 SMARCB1Q12824 385 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 FAM26FQ5R3K3 315 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 UNC13DQ70J99 1090 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 C1orf127Q8N9H9 656 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 ATAD1Q8NBU5 361 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 GLIS3Q8NEA6 775 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 OR10T2Q8NGX3 314 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 HPS3Q969F9 1004 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 ELSPBP1Q96BH3 223 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 TCEAL4Q96EI5 215 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 KXD1Q9BQD3 176 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 ZCWPW1Q9H0M4 648 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 TBC1D17Q9HA65 648 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 KIAA1586Q9HCI6 787 aa20.12■□□□□ 0.81
CHMP1A-207ENST00000549328 PVALEFA0A1B0GWK0 134 aa20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 ZNF233A6NK53 670 aa20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 H0Y858 1186 aa20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 RFX1P22670 979 aa20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 STARD6P59095 220 aa20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 SNRPFP62306 86 aaKnown RBP20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 SURF1Q15526 300 aa20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 WSCD1Q658N2 575 aa20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 POTEHQ6S545 545 aa20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 CCDC105Q8IYK2 499 aa20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 HS6ST3Q8IZP7 471 aa20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 LRRC52Q8N7C0 313 aa20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 C2orf15Q8WU43 125 aaKnown RBP20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 TMEM209Q96SK2 561 aa20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 GPR88Q9GZN0 384 aa20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 PDE11AQ9HCR9 933 aa20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 ITGA11Q9UKX5 1188 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms