RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 XKR3Q5GH77 459 aa6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 HABP4Q5JVS0 413 aaKnown RBP6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 SPECC1Q5M775 1068 aa6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 TMEM240Q5SV17 173 aa6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 SFRP5Q5T4F7 317 aa6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 MEI1Q5TIA1 1274 aa6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 LETMD1Q6P1Q0 360 aa6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 PSRC1Q6PGN9 363 aaPredicted RBP6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 TMCO2Q7Z6W1 182 aaPredicted RBP6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 MRPL41Q8IXM3 137 aaKnown RBP6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 RPUSD2Q8IZ73 545 aaKnown RBP6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 MFSD4AQ8N468 514 aa6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 RDM1Q8NG50 284 aa6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 LIN37Q96GY3 246 aaPredicted RBP6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 CDK5RAP3Q96JB5 506 aa6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 MAP7D2Q96T17 732 aa6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 RAB34Q9BZG1 259 aa6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 CEP131Q9UPN4 1083 aa6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 PCDHA2Q9Y5H9 948 aa6.53□□□□□ -1.36
EFCAB2-215ENST00000549220 MYO7AQ13402 2215 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 WASH4PA8MWX3 477 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 DKC1O60832 514 aaKnown RBP eCLIP6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 CSDE1O75534 798 aaKnown RBP6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 SLITRK3O94933 977 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 F13A1P00488 732 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 CHRNA1P02708 482 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 ZSCAN22P10073 491 aaPredicted RBP6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 FGFR4P22455 802 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 TMOD1P28289 359 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 HOXC8P31273 242 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 CD52P31358 61 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 ANP32AP39687 249 aaKnown RBP6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 KCNJ6P48051 423 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 LIG3P49916 1009 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 NLRP11P59045 1033 aaKnown RBP6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 ADAM17P78536 824 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 ATP2C1P98194 919 aaPredicted RBP6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 GRIN1Q05586 938 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 RAD51AP2Q09MP3 1159 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 ORC2Q13416 577 aaPredicted RBP6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 DRP2Q13474 957 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 EMC2Q15006 297 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 IL17AQ16552 155 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 TCTN1Q2MV58 587 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 KRT79Q5XKE5 535 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 HAUS3Q68CZ6 603 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 TAF2Q6P1X5 1199 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 B3GNT9Q6UX72 402 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 ANO5Q75V66 913 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 C16orf59Q7L2K0 433 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 OTUD6AQ7L8S5 288 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 RHPN2Q8IUC4 686 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 KSR1Q8IVT5 923 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 C4orf32Q8N8J7 132 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 BHLHE22Q8NFJ8 381 aaPredicted RBP6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 TMEM143Q96AN5 459 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 CHAMP1Q96JM3 812 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 NLRP4Q96MN2 994 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 FAM161BQ96MY7 647 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 USP28Q96RU2 1077 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 DUSP9Q99956 384 aaKnown RBP6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 ZSWIM4Q9H7M6 989 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 POLD4Q9HCU8 107 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 CYP26B1Q9NR63 512 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 DDX19AQ9NUU7 478 aaKnown RBP6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 TRPV2Q9Y5S1 764 aa6.52□□□□□ -1.37
EFCAB2-215ENST00000549220 SMIM35A0A1B0GVV1 85 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 MBLAC1A4D2B0 266 aaPredicted RBP6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 ARHGEF35A5YM69 484 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 E9PMD0 336 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 H3BS24 57 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 LAD1O00515 517 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 MAGEB2O15479 319 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 STBD1O95210 358 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 SRGAP2CP0DJJ0 459 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 EIF4BP23588 611 aaKnown RBP6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 BMP8BP34820 402 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 RFC2P35250 354 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 GDNFP39905 211 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 DNM2P50570 870 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 RABGGTBP53611 331 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 PAK2Q13177 524 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 LPIN1Q14693 890 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 FAM102BQ5T8I3 360 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 FAM109BQ6ICB4 259 aaPredicted RBP6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 CNKSR3Q6P9H4 555 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 DNAJC14Q6Y2X3 702 aaPredicted RBP6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 THAP5Q7Z6K1 395 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 CABP7Q86V35 215 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 CATSPER3Q86XQ3 398 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 C4orf19Q8IY42 314 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 KIAA0319LQ8IZA0 1049 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 MYOCDQ8IZQ8 938 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 DBF4BQ8NFT6 615 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 NEK9Q8TD19 979 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 SEPT8Q92599 483 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 ACSF2Q96CM8 615 aaPredicted RBP6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 ZNF396Q96N95 335 aaPredicted RBP6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 CLIC6Q96NY7 704 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 IFIH1Q9BYX4 1025 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms