RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 EXTL3O43909 919 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 JAK2O60674 1132 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 SEC24BO95487 1268 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 OR52Z1P0C646 297 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 MUTP22033 750 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 FGFR3P22607 806 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 GUCY1B3Q02153 619 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 FCHO2Q0JRZ9 810 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 ZNF423Q2M1K9 1284 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 CYP4A22Q5TCH4 519 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 PDZD4Q76G19 769 aaPredicted RBP9.28□□□□□ -0.92
TROAP-208ENST00000548817 ELMOD1Q8N336 334 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 DDX27Q96GQ7 796 aaKnown RBP9.28□□□□□ -0.92
TROAP-208ENST00000548817 TCHPQ9BT92 498 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 TMEM60Q9H2L4 133 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 SLC38A7Q9NVC3 462 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 LRWD1Q9UFC0 647 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 SLC8A2Q9UPR5 921 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 CDY1Q9Y6F8 540 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 PHLPP2Q6ZVD8 1323 aa9.28□□□□□ -0.92
TROAP-208ENST00000548817 VWA8A3KMH1 1905 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 TRIP11Q15643 1979 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 TTLL13PA6NNM8 815 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 SLC38A8A6NNN8 435 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 TMEM189-UBE2V1I3L0A0 370 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 CLCNKBP51801 687 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 ARPP19P56211 112 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 SIM1P81133 766 aaPredicted RBP9.27□□□□□ -0.93
TROAP-208ENST00000548817 SCAPQ12770 1279 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 LMAN2Q12907 356 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 HNRNPDQ14103 355 aaKnown RBP9.27□□□□□ -0.93
TROAP-208ENST00000548817 WDR44Q5JSH3 913 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 GLRA4Q5JXX5 417 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 EEF1DP3Q658K8 133 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 HAUS6Q7Z4H7 955 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 RAB44Q7Z6P3 723 aaPredicted RBP9.27□□□□□ -0.93
TROAP-208ENST00000548817 FAM184AQ8NB25 1140 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 ZSCAN18Q8TBC5 510 aaPredicted RBP9.27□□□□□ -0.93
TROAP-208ENST00000548817 BSNDQ8WZ55 320 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 UBL7Q96S82 380 aaPredicted RBP9.27□□□□□ -0.93
TROAP-208ENST00000548817 CORO1BQ9BR76 489 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 MRPL4Q9BYD3 311 aaKnown RBP9.27□□□□□ -0.93
TROAP-208ENST00000548817 BHMT2Q9H2M3 363 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 CCDC86Q9H6F5 360 aaKnown RBP9.27□□□□□ -0.93
TROAP-208ENST00000548817 EVLQ9UI08 416 aaPredicted RBP9.27□□□□□ -0.93
TROAP-208ENST00000548817 KCNG1Q9UIX4 513 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 KIAA1024Q9UPX6 916 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 DNM3Q9UQ16 869 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 USP20Q9Y2K6 914 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 NUB1Q9Y5A7 615 aa9.27□□□□□ -0.93
TROAP-208ENST00000548817 SMIM28A0A1B0GU29 152 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 HEPACAM2A8MVW5 462 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 WNT7AO00755 349 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 LARGE1O95461 756 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 TKTP29401 623 aaKnown RBP9.26□□□□□ -0.93
TROAP-208ENST00000548817 MARCKSP29966 332 aaPredicted RBP9.26□□□□□ -0.93
TROAP-208ENST00000548817 VIPR2P41587 438 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 PXNP49023 591 aaPredicted RBP9.26□□□□□ -0.93
TROAP-208ENST00000548817 EPHA5P54756 1037 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 OSTNP61366 133 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 DMP1Q13316 513 aaPredicted RBP9.26□□□□□ -0.93
TROAP-208ENST00000548817 PDIA5Q14554 519 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 NAB2Q15742 525 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 UPP1Q16831 310 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 ZNF568Q3ZCX4 644 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 ARHGAP29Q52LW3 1261 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 TTC38Q5R3I4 469 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 NT5DC1Q5TFE4 455 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 IQCEQ6IPM2 695 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 SLC8B1Q6J4K2 584 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 TXNDC11Q6PKC3 985 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 PIP4P1Q86T03 277 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 TCEAL8Q8IYN2 117 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 ZNF461Q8TAF7 563 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 ZNF512Q96ME7 567 aaPredicted RBP9.26□□□□□ -0.93
TROAP-208ENST00000548817 ACAP3Q96P50 834 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 PPP1R10Q96QC0 940 aaKnown RBP9.26□□□□□ -0.93
TROAP-208ENST00000548817 KIFC3Q9BVG8 833 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 CCDC113Q9H0I3 377 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 FOXP1Q9H334 677 aaPredicted RBP9.26□□□□□ -0.93
TROAP-208ENST00000548817 CYP4F11Q9HBI6 524 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 POLD4Q9HCU8 107 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 KMT5AQ9NQR1 393 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 EBF1Q9UH73 591 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 LIMCH1Q9UPQ0 1083 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 TNFSF13BQ9Y275 285 aa9.26□□□□□ -0.93
TROAP-208ENST00000548817 RBM19Q9Y4C8 960 aaKnown RBP9.26□□□□□ -0.93
TROAP-208ENST00000548817 ASXL3Q9C0F0 2248 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 I3L4J1 428 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 PODXLO00592 558 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 SYN3O14994 580 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 ABLIM3O94929 683 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 RPL9P32969 192 aaKnown RBP9.25□□□□□ -0.93
TROAP-208ENST00000548817 GRM5P41594 1212 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 DPP6P42658 865 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 MATR3P43243 847 aaKnown RBP eCLIP9.25□□□□□ -0.93
TROAP-208ENST00000548817 BRCC3P46736 316 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 SOX9P48436 509 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 TRAPPC10P48553 1259 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 FXR2P51116 673 aaKnown RBP eCLIP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms