RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 USP8P40818 1118 aa30.78■■■□□ 2.52
BRF1-213ENST00000548421 ARID5AQ03989 594 aa30.78■■■□□ 2.52
BRF1-213ENST00000548421 TTC39CQ8N584 583 aa30.78■■■□□ 2.52
BRF1-213ENST00000548421 BAG1Q99933 345 aaPredicted RBP30.78■■■□□ 2.52
BRF1-213ENST00000548421 HCSTQ9UBK5 93 aa30.78■■■□□ 2.52
BRF1-213ENST00000548421 PCDHB4Q9Y5E5 795 aa30.78■■■□□ 2.52
BRF1-213ENST00000548421 NRDCO43847 1150 aa30.77■■■□□ 2.52
BRF1-213ENST00000548421 HUS1O60921 280 aa30.77■■■□□ 2.52
BRF1-213ENST00000548421 MAGEA10P43363 369 aaPredicted RBP30.77■■■□□ 2.52
BRF1-213ENST00000548421 CDH8P55286 799 aa30.77■■■□□ 2.52
BRF1-213ENST00000548421 GPIHBP1Q8IV16 184 aa30.77■■■□□ 2.52
BRF1-213ENST00000548421 TOP6BLQ8N6T0 577 aa30.77■■■□□ 2.52
BRF1-213ENST00000548421 PHOSPHO2Q8TCD6 241 aa30.77■■■□□ 2.52
BRF1-213ENST00000548421 CNTN6Q9UQ52 1028 aa30.77■■■□□ 2.52
BRF1-213ENST00000548421 PRG3Q9Y2Y8 225 aaPredicted RBP30.77■■■□□ 2.52
BRF1-213ENST00000548421 ALDH2P05091 517 aa30.76■■■□□ 2.52
BRF1-213ENST00000548421 CDK17Q00537 523 aa30.76■■■□□ 2.52
BRF1-213ENST00000548421 BTG3Q14201 252 aaPredicted RBP30.76■■■□□ 2.52
BRF1-213ENST00000548421 SOWAHAQ2M3V2 549 aa30.76■■■□□ 2.52
BRF1-213ENST00000548421 TMEM270Q6UE05 265 aa30.76■■■□□ 2.52
BRF1-213ENST00000548421 CD300LGQ6UXG3 332 aa30.76■■■□□ 2.52
BRF1-213ENST00000548421 DSTYKQ6XUX3 929 aa30.76■■■□□ 2.52
BRF1-213ENST00000548421 DPH6Q7L8W6 267 aa30.76■■■□□ 2.52
BRF1-213ENST00000548421 IRF2BP2Q7Z5L9 587 aa30.76■■■□□ 2.52
BRF1-213ENST00000548421 APPL2Q8NEU8 664 aa30.76■■■□□ 2.52
BRF1-213ENST00000548421 HASPINQ8TF76 798 aa30.76■■■□□ 2.52
BRF1-213ENST00000548421 SENP8Q96LD8 212 aa30.76■■■□□ 2.52
BRF1-213ENST00000548421 CWH43Q9H720 699 aa30.76■■■□□ 2.52
BRF1-213ENST00000548421 CEP290O15078 2479 aa30.76■■■□□ 2.51
BRF1-213ENST00000548421 CYB561D2O14569 222 aa30.76■■■□□ 2.51
BRF1-213ENST00000548421 NRP1O14786 923 aa30.76■■■□□ 2.51
BRF1-213ENST00000548421 SLC11A1P49279 550 aa30.76■■■□□ 2.51
BRF1-213ENST00000548421 INCA1Q0VD86 236 aa30.76■■■□□ 2.51
BRF1-213ENST00000548421 RASIP1Q5U651 963 aa30.76■■■□□ 2.51
BRF1-213ENST00000548421 LIMS2Q7Z4I7 341 aa30.76■■■□□ 2.51
BRF1-213ENST00000548421 TMEM139Q8IV31 216 aa30.76■■■□□ 2.51
BRF1-213ENST00000548421 TRIM44Q96DX7 344 aaPredicted RBP30.76■■■□□ 2.51
BRF1-213ENST00000548421 COLEC11Q9BWP8 271 aa30.76■■■□□ 2.51
BRF1-213ENST00000548421 FAN1Q9Y2M0 1017 aa30.76■■■□□ 2.51
BRF1-213ENST00000548421 TSC2P49815 1807 aa30.75■■■□□ 2.51
BRF1-213ENST00000548421 TACC1O75410 805 aa30.75■■■□□ 2.51
BRF1-213ENST00000548421 SERPING1P05155 500 aa30.75■■■□□ 2.51
BRF1-213ENST00000548421 ITGB1P05556 798 aa30.75■■■□□ 2.51
BRF1-213ENST00000548421 PRKCIP41743 596 aa30.75■■■□□ 2.51
BRF1-213ENST00000548421 HTRA4P83105 476 aaPredicted RBP30.75■■■□□ 2.51
BRF1-213ENST00000548421 TIGD5Q53EQ6 642 aa30.75■■■□□ 2.51
BRF1-213ENST00000548421 HGSNATQ68CP4 663 aa30.75■■■□□ 2.51
BRF1-213ENST00000548421 CYP26C1Q6V0L0 522 aa30.75■■■□□ 2.51
BRF1-213ENST00000548421 ZBED2Q9BTP6 218 aa30.75■■■□□ 2.51
BRF1-213ENST00000548421 KCNF1Q9H3M0 494 aa30.75■■■□□ 2.51
BRF1-213ENST00000548421 L1RE1Q9UN81 338 aa30.75■■■□□ 2.51
BRF1-213ENST00000548421 BZW2Q9Y6E2 419 aaKnown RBP30.75■■■□□ 2.51
BRF1-213ENST00000548421 KIAA1671Q9BY89 1806 aa30.74■■■□□ 2.51
BRF1-213ENST00000548421 F8W810 466 aa30.74■■■□□ 2.51
BRF1-213ENST00000548421 CYP26A1O43174 497 aa30.74■■■□□ 2.51
BRF1-213ENST00000548421 GALTP07902 379 aa30.74■■■□□ 2.51
BRF1-213ENST00000548421 ATP2A2P16615 1042 aaKnown RBP30.74■■■□□ 2.51
BRF1-213ENST00000548421 CLCN1P35523 988 aa30.74■■■□□ 2.51
BRF1-213ENST00000548421 BCAR1P56945 870 aa30.74■■■□□ 2.51
BRF1-213ENST00000548421 CCZ1BP86790 482 aa30.74■■■□□ 2.51
BRF1-213ENST00000548421 CCZ1P86791 482 aaPredicted RBP30.74■■■□□ 2.51
BRF1-213ENST00000548421 KLHL30Q0D2K2 578 aa30.74■■■□□ 2.51
BRF1-213ENST00000548421 TMTC1Q8IUR5 882 aa30.74■■■□□ 2.51
BRF1-213ENST00000548421 HERC6Q8IVU3 1022 aa30.74■■■□□ 2.51
BRF1-213ENST00000548421 RBBP8NLQ8NC74 664 aaPredicted RBP30.74■■■□□ 2.51
BRF1-213ENST00000548421 ZNF830Q96NB3 372 aaPredicted RBP30.74■■■□□ 2.51
BRF1-213ENST00000548421 MRPL45Q9BRJ2 306 aaKnown RBP30.74■■■□□ 2.51
BRF1-213ENST00000548421 BARX2Q9UMQ3 279 aaPredicted RBP30.74■■■□□ 2.51
BRF1-213ENST00000548421 ARHGEF37A1IGU5 675 aa30.73■■■□□ 2.51
BRF1-213ENST00000548421 CILPO75339 1184 aa30.73■■■□□ 2.51
BRF1-213ENST00000548421 FAM163BP0C2L3 166 aa30.73■■■□□ 2.51
BRF1-213ENST00000548421 ODC1P11926 461 aa30.73■■■□□ 2.51
BRF1-213ENST00000548421 SKILP12757 684 aa30.73■■■□□ 2.51
BRF1-213ENST00000548421 BRCC3P46736 316 aa30.73■■■□□ 2.51
BRF1-213ENST00000548421 ZNF132P52740 706 aa30.73■■■□□ 2.51
BRF1-213ENST00000548421 TDRD12Q587J7 1177 aaKnown RBP30.73■■■□□ 2.51
BRF1-213ENST00000548421 PDCL2Q8N4E4 241 aa30.73■■■□□ 2.51
BRF1-213ENST00000548421 SUSD3Q96L08 255 aa30.73■■■□□ 2.51
BRF1-213ENST00000548421 CHP1Q99653 195 aa30.73■■■□□ 2.51
BRF1-213ENST00000548421 ARHGAP20Q9P2F6 1191 aa30.73■■■□□ 2.51
BRF1-213ENST00000548421 ADAM28Q9UKQ2 775 aa30.73■■■□□ 2.51
BRF1-213ENST00000548421 INSL6Q9Y581 213 aa30.73■■■□□ 2.51
BRF1-213ENST00000548421 M0QZQ0 153 aa30.72■■■□□ 2.51
BRF1-213ENST00000548421 TADA2AO75478 443 aa30.72■■■□□ 2.51
BRF1-213ENST00000548421 ALDH7A1P49419 539 aaKnown RBP30.72■■■□□ 2.51
BRF1-213ENST00000548421 BPIFB4P59827 614 aa30.72■■■□□ 2.51
BRF1-213ENST00000548421 HS1BP3Q53T59 392 aa30.72■■■□□ 2.51
BRF1-213ENST00000548421 SPOUT1Q5T280 376 aaKnown RBP30.72■■■□□ 2.51
BRF1-213ENST00000548421 ADGRF2Q8IZF7 708 aa30.72■■■□□ 2.51
BRF1-213ENST00000548421 TMEM86AQ8N2M4 240 aa30.72■■■□□ 2.51
BRF1-213ENST00000548421 MARCH5Q9NX47 278 aa30.72■■■□□ 2.51
BRF1-213ENST00000548421 TRAPPC3O43617 180 aa30.71■■■□□ 2.51
BRF1-213ENST00000548421 KBTBD7Q8WVZ9 684 aa30.71■■■□□ 2.51
BRF1-213ENST00000548421 HAUS4Q9H6D7 363 aa30.71■■■□□ 2.51
BRF1-213ENST00000548421 MRPL42Q9Y6G3 142 aaKnown RBP30.71■■■□□ 2.51
BRF1-213ENST00000548421 CARNS1A5YM72 827 aa30.7■■■□□ 2.51
BRF1-213ENST00000548421 I3L4J1 428 aa30.7■■■□□ 2.51
BRF1-213ENST00000548421 WARSP23381 471 aaKnown RBP30.7■■■□□ 2.51
BRF1-213ENST00000548421 PDE6CP51160 858 aa30.7■■■□□ 2.51
BRF1-213ENST00000548421 NDST1P52848 882 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms