RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 DNM2P50570 870 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 RILPL1Q5EBL4 403 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 MCTP1Q6DN14 999 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 CATSPER3Q86XQ3 398 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 ZSCAN18Q8TBC5 510 aaPredicted RBP15.38■□□□□ 0.05
PTCH1-217ENST00000548420 CEP170P1Q96L14 293 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 CAMK1GQ96NX5 476 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 PRORYQ9H606 182 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 TUFT1Q9NNX1 390 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 UBN1Q9NPG3 1134 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 FSCN3Q9NQT6 498 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 SUCLA2Q9P2R7 463 aaPredicted RBP15.38■□□□□ 0.05
PTCH1-217ENST00000548420 TNRC6BQ9UPQ9 1833 aaKnown RBP15.38■□□□□ 0.05
PTCH1-217ENST00000548420 MGAQ8IWI9 3026 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 ATMQ13315 3056 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 ARHGEF37A1IGU5 675 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 K7ELQ4 463 aaPredicted RBP15.37■□□□□ 0.05
PTCH1-217ENST00000548420 MUTP22033 750 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 RPA1P27694 616 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 RFC5P40937 340 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 PRPHP41219 470 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 FCHO2Q0JRZ9 810 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 IL17AQ16552 155 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 TRIM61Q5EBN2 209 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 FSTL4Q6MZW2 842 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 CYP2U1Q7Z449 544 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 MARCH9Q86YJ5 346 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 SCUBE3Q8IX30 993 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 IGSF22Q8N9C0 903 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 PIP4K2CQ8TBX8 421 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 SLC7A3Q8WY07 619 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 PIGKQ92643 395 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 NLRP4Q96MN2 994 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 TMEM74BQ9NUR3 256 aa15.37■□□□□ 0.05
PTCH1-217ENST00000548420 SF3B1O75533 1304 aaKnown RBP eCLIP15.37■□□□□ 0.054e-7■■■■■ 133.7
PTCH1-217ENST00000548420 GOLGA4Q13439 2230 aaKnown RBP15.36■□□□□ 0.05
PTCH1-217ENST00000548420 MED24O75448 989 aa15.36■□□□□ 0.05
PTCH1-217ENST00000548420 KIF4AO95239 1232 aa15.36■□□□□ 0.05
PTCH1-217ENST00000548420 PDCP20941 246 aa15.36■□□□□ 0.05
PTCH1-217ENST00000548420 ITPKBP27987 946 aa15.36■□□□□ 0.05
PTCH1-217ENST00000548420 RARRES1P49788 294 aa15.36■□□□□ 0.05
PTCH1-217ENST00000548420 CYP4F3Q08477 520 aa15.36■□□□□ 0.05
PTCH1-217ENST00000548420 HSP90AA2PQ14568 343 aaPredicted RBP15.36■□□□□ 0.05
PTCH1-217ENST00000548420 XKR9Q5GH70 373 aa15.36■□□□□ 0.05
PTCH1-217ENST00000548420 RTL10Q7L3V2 364 aa15.36■□□□□ 0.05
PTCH1-217ENST00000548420 LSM14AQ8ND56 463 aaKnown RBP15.36■□□□□ 0.05
PTCH1-217ENST00000548420 CHFRQ96EP1 664 aa15.36■□□□□ 0.05
PTCH1-217ENST00000548420 XPNPEP1Q9NQW7 623 aa15.36■□□□□ 0.05
PTCH1-217ENST00000548420 MYO9AB2RTY4 2548 aa15.35■□□□□ 0.05
PTCH1-217ENST00000548420 CD59P13987 128 aa15.35■□□□□ 0.05
PTCH1-217ENST00000548420 ATP2C1P98194 919 aaPredicted RBP15.35■□□□□ 0.05
PTCH1-217ENST00000548420 TNK2Q07912 1038 aa15.35■□□□□ 0.05
PTCH1-217ENST00000548420 LMAN2Q12907 356 aa15.35■□□□□ 0.05
PTCH1-217ENST00000548420 KARSQ15046 597 aaKnown RBP15.35■□□□□ 0.05
PTCH1-217ENST00000548420 ERMNQ8TAM6 284 aa15.35■□□□□ 0.05
PTCH1-217ENST00000548420 MTRRQ9UBK8 725 aa15.35■□□□□ 0.05
PTCH1-217ENST00000548420 EBF1Q9UH73 591 aa15.35■□□□□ 0.05
PTCH1-217ENST00000548420 CDY1Q9Y6F8 540 aa15.35■□□□□ 0.05
PTCH1-217ENST00000548420 ANKRD17O75179 2603 aaKnown RBP15.35■□□□□ 0.05
PTCH1-217ENST00000548420 ZNF197O14709 1029 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 ASAP2O43150 1006 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 DGAT1O75907 488 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 FTH1P19P0C7X4 201 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 SYT1P21579 422 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 AKAP5P24588 427 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 CFHR1Q03591 330 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 KCNC4Q03721 635 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 POU5F1BQ06416 359 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 EMC2Q15006 297 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 ECM1Q16610 540 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 PDXDC1Q6P996 788 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 PDZD4Q76G19 769 aaPredicted RBP15.34■□□□□ 0.05
PTCH1-217ENST00000548420 BRAPQ7Z569 592 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 SLCO6A1Q86UG4 719 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 CNNM3Q8NE01 707 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 OR2I1PQ8NGU4 316 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 FAM200AQ8TCP9 573 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 PIGOQ8TEQ8 1089 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 TCP11Q8WWU5 503 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 PRPF31Q8WWY3 499 aaKnown RBP15.34■□□□□ 0.05
PTCH1-217ENST00000548420 TMEM143Q96AN5 459 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 NACC1Q96RE7 527 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 TMEM209Q96SK2 561 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 FBRSL1Q9HCM7 1045 aaKnown RBP15.34■□□□□ 0.05
PTCH1-217ENST00000548420 COL4A3BPQ9Y5P4 624 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 STK24Q9Y6E0 443 aa15.34■□□□□ 0.05
PTCH1-217ENST00000548420 PTPRDP23468 1912 aa15.33■□□□□ 0.05
PTCH1-217ENST00000548420 A0A087WWV3 80 aa15.33■□□□□ 0.04
PTCH1-217ENST00000548420 RNF40O75150 1001 aa15.33■□□□□ 0.04
PTCH1-217ENST00000548420 SEC24AO95486 1093 aa15.33■□□□□ 0.04
PTCH1-217ENST00000548420 ARL2P36404 184 aa15.33■□□□□ 0.04
PTCH1-217ENST00000548420 ABCG1P45844 678 aa15.33■□□□□ 0.04
PTCH1-217ENST00000548420 DHPSP49366 369 aaPredicted RBP15.33■□□□□ 0.04
PTCH1-217ENST00000548420 CACNB1Q02641 598 aaPredicted RBP15.33■□□□□ 0.04
PTCH1-217ENST00000548420 LAMTOR4Q0VGL1 99 aa15.33■□□□□ 0.04
PTCH1-217ENST00000548420 TEAD2Q15562 447 aa15.33■□□□□ 0.04
PTCH1-217ENST00000548420 TRIP6Q15654 476 aaKnown RBP15.33■□□□□ 0.04
PTCH1-217ENST00000548420 TMEM196Q5HYL7 178 aa15.33■□□□□ 0.04
PTCH1-217ENST00000548420 ARL6IP4Q66PJ3 421 aaKnown RBP15.33■□□□□ 0.04
PTCH1-217ENST00000548420 DTHD1Q6ZMT9 781 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms