RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 CXCL14O95715 111 aa18.7■□□□□ 0.58
HDAC7-227ENST00000548080 SKILP12757 684 aa18.7■□□□□ 0.58
HDAC7-227ENST00000548080 GTF2H1P32780 548 aa18.7■□□□□ 0.58
HDAC7-227ENST00000548080 KRT9P35527 623 aa18.7■□□□□ 0.58
HDAC7-227ENST00000548080 NRIP1P48552 1158 aa18.7■□□□□ 0.58
HDAC7-227ENST00000548080 CCZ1BP86790 482 aa18.7■□□□□ 0.58
HDAC7-227ENST00000548080 CCZ1P86791 482 aaPredicted RBP18.7■□□□□ 0.58
HDAC7-227ENST00000548080 RBM10P98175 930 aaKnown RBP18.7■□□□□ 0.58
HDAC7-227ENST00000548080 TFAMQ00059 246 aaKnown RBP18.7■□□□□ 0.58
HDAC7-227ENST00000548080 PPP3CAQ08209 521 aa18.7■□□□□ 0.58
HDAC7-227ENST00000548080 HYAL1Q12794 435 aa18.7■□□□□ 0.58
HDAC7-227ENST00000548080 CBWD6Q4V339 395 aa18.7■□□□□ 0.58
HDAC7-227ENST00000548080 CBWD3Q5JTY5 395 aa18.7■□□□□ 0.58
HDAC7-227ENST00000548080 CBWD5Q5RIA9 395 aa18.7■□□□□ 0.58
HDAC7-227ENST00000548080 EP400NLQ6ZTU2 488 aa18.7■□□□□ 0.58
HDAC7-227ENST00000548080 ZNF397Q8NF99 534 aaPredicted RBP18.7■□□□□ 0.58
HDAC7-227ENST00000548080 HERC2P3Q9BVR0 1158 aa18.7■□□□□ 0.58
HDAC7-227ENST00000548080 PLCB1Q9NQ66 1216 aa18.7■□□□□ 0.58
HDAC7-227ENST00000548080 UBQLN1Q9UMX0 589 aaKnown RBP18.7■□□□□ 0.58
HDAC7-227ENST00000548080 PMM2O15305 246 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 LINC01565O15544 149 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 IL18RAPO95256 599 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 SOD2P04179 222 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 SLC9A1P19634 815 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 PON1P27169 355 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 GCLMP48507 274 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 ZBED6P86452 979 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 MYL7Q01449 175 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 CETN1Q12798 172 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 CEP57Q86XR8 500 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 CD302Q8IX05 232 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 BEST2Q8NFU1 509 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 OR8K1Q8NGG5 319 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 UROC1Q96N76 676 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 ASB7Q9H672 318 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 GCNT4Q9P109 453 aa18.69■□□□□ 0.58
HDAC7-227ENST00000548080 EPHB6O15197 1021 aa18.68■□□□□ 0.58
HDAC7-227ENST00000548080 NOL4O94818 638 aa18.68■□□□□ 0.58
HDAC7-227ENST00000548080 EFEMP2O95967 443 aa18.68■□□□□ 0.58
HDAC7-227ENST00000548080 SMC1AQ14683 1233 aaKnown RBP18.68■□□□□ 0.58
HDAC7-227ENST00000548080 PTPN14Q15678 1187 aa18.68■□□□□ 0.58
HDAC7-227ENST00000548080 TSR1Q2NL82 804 aaKnown RBP18.68■□□□□ 0.58
HDAC7-227ENST00000548080 FAM171A1Q5VUB5 890 aa18.68■□□□□ 0.58
HDAC7-227ENST00000548080 DPY19L2P1Q6NXN4 242 aa18.68■□□□□ 0.58
HDAC7-227ENST00000548080 DCLRE1AQ6PJP8 1040 aa18.68■□□□□ 0.58
HDAC7-227ENST00000548080 GLYCTKQ8IVS8 523 aa18.68■□□□□ 0.58
HDAC7-227ENST00000548080 EHBP1Q8NDI1 1231 aa18.68■□□□□ 0.58
HDAC7-227ENST00000548080 POP1Q99575 1024 aaKnown RBP18.68■□□□□ 0.58
HDAC7-227ENST00000548080 BAG1Q99933 345 aaPredicted RBP18.68■□□□□ 0.58
HDAC7-227ENST00000548080 ABHD10Q9NUJ1 306 aa18.68■□□□□ 0.58
HDAC7-227ENST00000548080 CEP72Q9P209 647 aa18.68■□□□□ 0.58
HDAC7-227ENST00000548080 SCN1AP35498 2009 aa18.68■□□□□ 0.58
HDAC7-227ENST00000548080 SPTBN5Q9NRC6 3674 aaKnown RBP18.67■□□□□ 0.58
HDAC7-227ENST00000548080 SF3B1O75533 1304 aaKnown RBP eCLIP18.67■□□□□ 0.583e-7■■■■■ 62.4
HDAC7-227ENST00000548080 CARNS1A5YM72 827 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 C2orf71A6NGG8 1288 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 ESPNB1AK53 854 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 DLATP10515 647 aaKnown RBP18.67■□□□□ 0.58
HDAC7-227ENST00000548080 CTSAP10619 480 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 RPL17P18621 184 aaKnown RBP18.67■□□□□ 0.58
HDAC7-227ENST00000548080 CLDN10P78369 228 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 RTP2Q5QGT7 225 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 KLHDC7AQ5VTJ3 777 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 LLGL2Q6P1M3 1020 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 PRSS55Q6UWB4 352 aaPredicted RBP18.67■□□□□ 0.58
HDAC7-227ENST00000548080 RNF168Q8IYW5 571 aaPredicted RBP18.67■□□□□ 0.58
HDAC7-227ENST00000548080 OR5B17Q8NGF7 314 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 RIN2Q8WYP3 895 aaPredicted RBP18.67■□□□□ 0.58
HDAC7-227ENST00000548080 DDX27Q96GQ7 796 aaKnown RBP18.67■□□□□ 0.58
HDAC7-227ENST00000548080 FNBP1Q96RU3 617 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 DNAJC7Q99615 494 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 MTMR12Q9C0I1 747 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 GANQ9H2C0 597 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 TLE6Q9H808 572 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 TMEM8AQ9HCN3 771 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 DPP3Q9NY33 737 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 PYCARDQ9ULZ3 195 aa18.67■□□□□ 0.58
HDAC7-227ENST00000548080 XPOTO43592 962 aaKnown RBP18.66■□□□□ 0.58
HDAC7-227ENST00000548080 URODP06132 367 aa18.66■□□□□ 0.58
HDAC7-227ENST00000548080 MSNP26038 577 aaKnown RBP18.66■□□□□ 0.58
HDAC7-227ENST00000548080 TKTP29401 623 aaKnown RBP18.66■□□□□ 0.58
HDAC7-227ENST00000548080 LRPAP1P30533 357 aa18.66■□□□□ 0.58
HDAC7-227ENST00000548080 GLUD2P49448 558 aa18.66■□□□□ 0.58
HDAC7-227ENST00000548080 MXI1P50539 228 aa18.66■□□□□ 0.58
HDAC7-227ENST00000548080 SURF1Q15526 300 aa18.66■□□□□ 0.58
HDAC7-227ENST00000548080 C9orf57Q5W0N0 161 aa18.66■□□□□ 0.58
HDAC7-227ENST00000548080 KRT39Q6A163 491 aa18.66■□□□□ 0.58
HDAC7-227ENST00000548080 KIAA1841Q6NSI8 718 aa18.66■□□□□ 0.58
HDAC7-227ENST00000548080 CACNA2D4Q7Z3S7 1137 aa18.66■□□□□ 0.58
HDAC7-227ENST00000548080 TMEM139Q8IV31 216 aa18.66■□□□□ 0.58
HDAC7-227ENST00000548080 MRPL43Q8N983 215 aaKnown RBP18.66■□□□□ 0.58
HDAC7-227ENST00000548080 NAA15Q9BXJ9 866 aaKnown RBP18.66■□□□□ 0.58
HDAC7-227ENST00000548080 INTS2Q9H0H0 1204 aaKnown RBP18.66■□□□□ 0.58
HDAC7-227ENST00000548080 SIX2Q9NPC8 291 aa18.66■□□□□ 0.58
HDAC7-227ENST00000548080 NGRNQ9NPE2 291 aaKnown RBP18.66■□□□□ 0.58
HDAC7-227ENST00000548080 DERAQ9Y315 318 aa18.66■□□□□ 0.58
HDAC7-227ENST00000548080 C2CD2Q9Y426 696 aa18.66■□□□□ 0.58
HDAC7-227ENST00000548080 NUB1Q9Y5A7 615 aa18.66■□□□□ 0.58
HDAC7-227ENST00000548080 TMEM189-UBE2V1I3L0A0 370 aa18.65■□□□□ 0.58
HDAC7-227ENST00000548080 CYP3A5P20815 502 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms