RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 MRPL58Q14197 206 aaKnown RBP12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 SGSM1Q2NKQ1 1148 aa12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 ZSCAN23Q3MJ62 389 aa12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 ANO6Q4KMQ2 910 aa12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 SCARA3Q6AZY7 606 aa12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 ZNF280DQ6N043 979 aa12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 PRSS55Q6UWB4 352 aaPredicted RBP12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 DPH6Q7L8W6 267 aa12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 TOP6BLQ8N6T0 577 aa12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 SPATA18Q8TC71 538 aa12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 TAF4BQ92750 862 aa12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 KLHL5Q96PQ7 755 aa12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 IMPG2Q9BZV3 1241 aa12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 XYLT2Q9H1B5 865 aa12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 MMRN2Q9H8L6 949 aa12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 SNX9Q9Y5X1 595 aa12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 DENND4CQ5VZ89 1909 aa12.23□□□□□ -0.45
CALCOCO1-208ENST00000547988 ZNF638Q14966 1978 aaKnown RBP12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 PMM2O15305 246 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 TEX28O15482 410 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 HUS1O60921 280 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 ASS1P00966 412 aaKnown RBP12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 HLA-DRAP01903 254 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 SRGAP2BP0DMP2 458 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 MYL6P60660 151 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 TNNC1P63316 161 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 MYL5Q02045 173 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 COL19A1Q14993 1142 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 CCDC85BQ15834 202 aaPredicted RBP12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 ZNF699Q32M78 642 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 OVOS1Q6IE37 1185 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 RBM23Q86U06 439 aaKnown RBP12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 METTL23Q86XA0 190 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 IRF2BP1Q8IU81 584 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 TMEM86AQ8N2M4 240 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 EFHBQ8N7U6 833 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 CCDC150Q8NCX0 1101 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 FBXL13Q8NEE6 735 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 BPIFA3Q9BQP9 254 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 MAGEC2Q9UBF1 373 aaPredicted RBP12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 COQ4Q9Y3A0 265 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 NFE2L3Q9Y4A8 694 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 PRUNE2Q8WUY3 3088 aa12.22□□□□□ -0.45
CALCOCO1-208ENST00000547988 DOCK6Q96HP0 2047 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 PATJQ8NI35 1801 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 PER2O15055 1255 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 P4HA2O15460 535 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 TBC1D4O60343 1298 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 CLASP2O75122 1294 aaKnown RBP12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 CAVIN2O95810 425 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 FAM163BP0C2L3 166 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 P4HA1P13674 534 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 KLRC2P26717 231 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 FMO5P49326 533 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 CLCN4P51793 760 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 MYL7Q01449 175 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 CETN1Q12798 172 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 KCNH2Q12809 1159 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 KCNC3Q14003 757 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 CTC1Q2NKJ3 1217 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 WDR72Q3MJ13 1102 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 CTXN3Q4LDR2 81 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 CBWD6Q4V339 395 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 ZNF667Q5HYK9 610 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 CBWD3Q5JTY5 395 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 CBWD5Q5RIA9 395 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 SLC8B1Q6J4K2 584 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 TMEM184AQ6ZMB5 413 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 LIMS2Q7Z4I7 341 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 PDCL2Q8N4E4 241 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 TAS1R2Q8TE23 839 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 PABPC5Q96DU9 382 aaKnown RBP12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 CLSTN3Q9BQT9 956 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 IGFLR1Q9H665 355 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 RAB20Q9NX57 234 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 DPP7Q9UHL4 492 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 L1RE1Q9UN81 338 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 TIMM13Q9Y5L4 95 aaPredicted RBP12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 CDY1Q9Y6F8 540 aa12.21□□□□□ -0.45
CALCOCO1-208ENST00000547988 OBSL1O75147 1896 aa12.21□□□□□ -0.46
CALCOCO1-208ENST00000547988 OR6C75A6NL08 312 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 KCNJ18B7U540 433 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 CLSTN1O94985 981 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 GLP2RO95838 553 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 GLUD1P00367 558 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 AFPP02771 609 aaKnown RBP12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 PRKCSHP14314 528 aaPredicted RBP12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 RPL17P18621 184 aaKnown RBP12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 EEF1GP26641 437 aaKnown RBP12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 GTF2F1P35269 517 aaKnown RBP eCLIP12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 MTIF2P46199 727 aaKnown RBP12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 LHX1P48742 406 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 ZNF165P49910 485 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 NOP14P78316 857 aaKnown RBP12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 ADAM15Q13444 863 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 RAB33AQ14088 237 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 KCNJ12Q14500 433 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 SKIV2LQ15477 1246 aaKnown RBP12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 MAN2A1Q16706 1144 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms