RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 CDT1Q9H211 546 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 FZD8Q9H461 694 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 PTPRHQ9HD43 1115 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 CPSF3Q9UKF6 684 aaKnown RBP8.66□□□□□ -1.02
CCDC65-203ENST00000547861 ZHX1Q9UKY1 873 aaPredicted RBP8.66□□□□□ -1.02
CCDC65-203ENST00000547861 PHF24Q9UPV7 400 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 DDX3YO15523 660 aaKnown RBP8.65□□□□□ -1.03
CCDC65-203ENST00000547861 ASAP2O43150 1006 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 MTA2O94776 668 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 AKR1A1P14550 325 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 ACO1P21399 889 aaKnown RBP8.65□□□□□ -1.03
CCDC65-203ENST00000547861 MCM3P25205 808 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 PHKA2P46019 1235 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 PLA2G4AP47712 749 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 ACVR2BQ13705 512 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 NCOA4Q13772 614 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 CLEC16AQ2KHT3 1053 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 C1orf53Q5VUE5 145 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 SCARA3Q6AZY7 606 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 CCDC70Q6NSX1 233 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 C8orf74Q6P047 294 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 EFCAB13Q8IY85 973 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 GSPT2Q8IYD1 628 aaKnown RBP8.65□□□□□ -1.03
CCDC65-203ENST00000547861 UBR7Q8N806 425 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 CEP120Q8N960 986 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 USP38Q8NB14 1042 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 ZNF653Q96CK0 615 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 PPP1R16BQ96T49 567 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 TCHPQ9BT92 498 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 LRRC1Q9BTT6 524 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 MTMR12Q9C0I1 747 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 ABHD16BQ9H3Z7 469 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 IFT122Q9HBG6 1241 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 CTTNBP2NLQ9P2B4 639 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 AMFRQ9UKV5 643 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 NOC2LQ9Y3T9 749 aaKnown RBP8.65□□□□□ -1.03
CCDC65-203ENST00000547861 NUB1Q9Y5A7 615 aa8.65□□□□□ -1.03
CCDC65-203ENST00000547861 A0A1W2PQ45 241 aaPredicted RBP8.64□□□□□ -1.03
CCDC65-203ENST00000547861 A0A1W2PQY0 241 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 PGRMC1O00264 195 aaKnown RBP8.64□□□□□ -1.03
CCDC65-203ENST00000547861 MAGEB2O15479 319 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 CEP104O60308 925 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 PQBP1O60828 265 aaKnown RBP8.64□□□□□ -1.03
CCDC65-203ENST00000547861 PHACTR2O75167 634 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 ADAMTS4O75173 837 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 ZMYND10O75800 440 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 ASS1P00966 412 aaKnown RBP8.64□□□□□ -1.03
CCDC65-203ENST00000547861 CYP1A2P05177 515 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 IQCF3P0C7M6 154 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 MYBL2P10244 700 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 TBXAS1P24557 533 aaPredicted RBP8.64□□□□□ -1.03
CCDC65-203ENST00000547861 ITGB8P26012 769 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 AP3M2P53677 418 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 GPC5P78333 572 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 PPFIA1Q13136 1202 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 SURF1Q15526 300 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 AMHR2Q16671 573 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 FAM187BQ17R55 369 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 ZNF697Q5TEC3 545 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 DCAF12L1Q5VU92 463 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 MTHFD1LQ6UB35 978 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 CDR2LQ86X02 465 aaPredicted RBP8.64□□□□□ -1.03
CCDC65-203ENST00000547861 ZNF677Q86XU0 584 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 THNSL1Q8IYQ7 743 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 RASGEF1CQ8N431 466 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 ACTRT1Q8TDG2 376 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 HDAC7Q8WUI4 952 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 PRMT7Q9NVM4 692 aaPredicted RBP8.64□□□□□ -1.03
CCDC65-203ENST00000547861 DMGDHQ9UI17 866 aaKnown RBP8.64□□□□□ -1.03
CCDC65-203ENST00000547861 GTF3C4Q9UKN8 822 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 AKT3Q9Y243 479 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 TNFSF13BQ9Y275 285 aa8.64□□□□□ -1.03
CCDC65-203ENST00000547861 A0A087WZ62 844 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 TMEM110-MUSTN1A8MSY1 372 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 H3BRB1 525 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 MAP2K7O14733 419 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 VTNP04004 478 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 CLTBP09497 229 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 CXCL8P10145 99 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 RNASE9P60153 205 aaKnown RBP8.63□□□□□ -1.03
CCDC65-203ENST00000547861 MRPS25P82663 173 aaKnown RBP8.63□□□□□ -1.03
CCDC65-203ENST00000547861 POU5F1BQ06416 359 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 GRIK4Q16099 956 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 MAP9Q49MG5 647 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 ACAD10Q6JQN1 1059 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 TMEM192Q8IY95 271 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 MSL3Q8N5Y2 521 aaKnown RBP8.63□□□□□ -1.03
CCDC65-203ENST00000547861 RBBP8NLQ8NC74 664 aaPredicted RBP8.63□□□□□ -1.03
CCDC65-203ENST00000547861 ZNF564Q8TBZ8 553 aaPredicted RBP8.63□□□□□ -1.03
CCDC65-203ENST00000547861 CALR3Q96L12 384 aaKnown RBP8.63□□□□□ -1.03
CCDC65-203ENST00000547861 FDXACB1Q9BRP7 624 aaPredicted RBP8.63□□□□□ -1.03
CCDC65-203ENST00000547861 SELENOOQ9BVL4 669 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 NUP85Q9BW27 656 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 IMPG2Q9BZV3 1241 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 PDZD7Q9H5P4 517 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 TUT1Q9H6E5 874 aaKnown RBP8.63□□□□□ -1.03
CCDC65-203ENST00000547861 STIM2Q9P246 746 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 CHORDC1Q9UHD1 332 aaPredicted RBP8.63□□□□□ -1.03
CCDC65-203ENST00000547861 TMEM59LQ9UK28 342 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 L1RE1Q9UN81 338 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms