RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 TM4SF4P48230 202 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 ALDH5A1P51649 535 aaPredicted RBP5.12□□□□□ -1.59
SCAF11-210ENST00000547654 RNASE9P60153 205 aaKnown RBP5.12□□□□□ -1.59
SCAF11-210ENST00000547654 SETQ01105 290 aaPredicted RBP5.12□□□□□ -1.59
SCAF11-210ENST00000547654 KIF23Q02241 960 aaPredicted RBP5.12□□□□□ -1.59
SCAF11-210ENST00000547654 TRIM14Q14142 442 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 LLGL1Q15334 1064 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 SLC4A8Q2Y0W8 1093 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 BEAN1Q3B7T3 259 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 ATAT1Q5SQI0 421 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 DARS2Q6PI48 645 aaKnown RBP5.12□□□□□ -1.59
SCAF11-210ENST00000547654 LMBR1LQ6UX01 489 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 KRBA2Q6ZNG9 492 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 MMS22LQ6ZRQ5 1243 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 SPATA31D4Q6ZUB0 917 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 XYLT1Q86Y38 959 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 DENND1CQ8IV53 801 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 TMTC2Q8N394 836 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 CPEB3Q8NE35 698 aaKnown RBP5.12□□□□□ -1.59
SCAF11-210ENST00000547654 RAX2Q96IS3 184 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 PAGR1Q9BTK6 254 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 PRDM13Q9H4Q3 707 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 ALG13Q9NP73 1137 aaKnown RBP5.12□□□□□ -1.59
SCAF11-210ENST00000547654 SYBUQ9NX95 663 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 KCNG1Q9UIX4 513 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 IPPQ9Y573 584 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 PCDHGB6Q9Y5F9 930 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 DGKBQ9Y6T7 804 aa5.12□□□□□ -1.59
SCAF11-210ENST00000547654 hCG_1642624A0A1W2PR95 340 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 UNC119BA6NIH7 251 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 H3BML4 177 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 INO80B-WBP1J3KQ70 363 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 C1RP00736 705 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 GASTP01350 101 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 HLA-DOAP06340 250 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 OSMP13725 252 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 SLC5A1P13866 664 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 AGXTP21549 392 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 C5AR1P21730 350 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 DDX6P26196 483 aaKnown RBP eCLIP5.11□□□□□ -1.59
SCAF11-210ENST00000547654 GUCY1A2P33402 732 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 CRHR1P34998 444 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 CASP2P42575 452 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 RENBPP51606 427 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 SLC16A1P53985 500 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 SEC24CP53992 1094 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 CACNB3P54284 484 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 NRG3P56975 720 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 BLOC1S1P78537 153 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 SRSF2Q01130 221 aaKnown RBP5.11□□□□□ -1.59
SCAF11-210ENST00000547654 NHLH2Q02577 135 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 SEPT2Q15019 361 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 BMT2Q1RMZ1 405 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 ANO4Q32M45 955 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 EPHA10Q5JZY3 1008 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 PRAMEF14Q5SWL7 426 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 FAM102AQ5T9C2 384 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-210ENST00000547654 ZNF572Q7Z3I7 529 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-210ENST00000547654 SKAP1Q86WV1 359 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 TRMT2AQ8IZ69 625 aaKnown RBP5.11□□□□□ -1.59
SCAF11-210ENST00000547654 SPATA5Q8NB90 893 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 OR10H5Q8NGA6 315 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 OR2I1PQ8NGU4 316 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 SLC35B2Q8TB61 432 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 LINC00476Q8WZB0 136 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 C1GALT1C1Q96EU7 318 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 MVB12AQ96EY5 273 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 SGCZQ96LD1 299 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 CRB3Q9BUF7 120 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 SPATA5L1Q9BVQ7 753 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 INO80BQ9C086 356 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-210ENST00000547654 QRSL1Q9H0R6 528 aaKnown RBP5.11□□□□□ -1.59
SCAF11-210ENST00000547654 TMEM60Q9H2L4 133 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 TRMT13Q9NUP7 481 aaKnown RBP5.11□□□□□ -1.59
SCAF11-210ENST00000547654 FAM30AQ9NZY2 134 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 RPTORQ8N122 1335 aa5.11□□□□□ -1.59
SCAF11-210ENST00000547654 TBKBP1A7MCY6 615 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 RASA4BC9J798 803 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 DIRC3C9JPN6 131 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 RASA4O43374 803 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 MGEA5O60502 916 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 NDUFS2O75306 463 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 POU2F2P09086 479 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 MTHFD2P13995 350 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 ALOX15P16050 662 aaPredicted RBP5.1□□□□□ -1.59
SCAF11-210ENST00000547654 XPAP23025 273 aaPredicted RBP5.1□□□□□ -1.59
SCAF11-210ENST00000547654 PEX2P28328 305 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 BMPR1AP36894 532 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 SREBF1P36956 1147 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 MCAMP43121 646 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 SLC5A3P53794 718 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 MXRA7P84157 204 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 SEMA5AQ13591 1074 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 PUM3Q15397 648 aaKnown RBP5.1□□□□□ -1.59
SCAF11-210ENST00000547654 PRR16Q569H4 304 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 TOR2AQ5JU69 321 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 KRTAP5-11Q6L8G4 156 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 OVCH2Q7RTZ1 564 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 BOLLQ8N9W6 283 aaKnown RBP5.1□□□□□ -1.59
SCAF11-210ENST00000547654 GPR156Q8NFN8 814 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms