RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 SMC1AQ14683 1233 aaKnown RBP24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 ZNF667Q5HYK9 610 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 MIIPQ5JXC2 388 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 KIAA0319Q5VV43 1072 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 PLPP4Q5VZY2 271 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 SEMA4DQ92854 862 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 PI4K2AQ9BTU6 479 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 TAB2Q9NYJ8 693 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 LIMA1Q9UHB6 759 aaKnown RBP24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 PES1O00541 588 aaKnown RBP24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 C2CD2LO14523 706 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 ATP1A3P13637 1013 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 FOSL2P15408 326 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 TYMPP19971 482 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 CA8P35219 290 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 TNNC1P63316 161 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 PDXDC1Q6P996 788 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 AUTS2Q8WXX7 1259 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 RIN2Q8WYP3 895 aaPredicted RBP24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 PIK3R5Q8WYR1 880 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 VPS16Q9H269 839 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 NXF1Q9UBU9 619 aaKnown RBP24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 DSEQ9UL01 958 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 TIMM13Q9Y5L4 95 aaPredicted RBP24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 IRAK3Q9Y616 596 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 CYP11A1P05108 521 aa24.87■■□□□ 1.57
SMARCD1-203ENST00000547247 ADGRE1Q14246 886 aa24.87■■□□□ 1.57
SMARCD1-203ENST00000547247 PTPN14Q15678 1187 aa24.87■■□□□ 1.57
SMARCD1-203ENST00000547247 WDR44Q5JSH3 913 aa24.87■■□□□ 1.57
SMARCD1-203ENST00000547247 ANKS3Q6ZW76 656 aa24.87■■□□□ 1.57
SMARCD1-203ENST00000547247 DPH6Q7L8W6 267 aa24.87■■□□□ 1.57
SMARCD1-203ENST00000547247 TOP6BLQ8N6T0 577 aa24.87■■□□□ 1.57
SMARCD1-203ENST00000547247 MRPL43Q8N983 215 aaKnown RBP24.87■■□□□ 1.57
SMARCD1-203ENST00000547247 MMS19Q96T76 1030 aa24.87■■□□□ 1.57
SMARCD1-203ENST00000547247 VWA8A3KMH1 1905 aa24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 EYSQ5T1H1 3165 aa24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 LRRC10BA6NIK2 292 aa24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 LRRN2O75325 713 aa24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 P4HA1P13674 534 aa24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 POU3F3P20264 500 aaPredicted RBP24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 IGFBP4P22692 258 aa24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 NOP14P78316 857 aaKnown RBP24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 YWHAHQ04917 246 aaPredicted RBP24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 VARS2Q5ST30 1063 aaKnown RBP24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 SPOPLQ6IQ16 392 aa24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 METTL23Q86XA0 190 aa24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 ELMO3Q96BJ8 720 aa24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 L1RE1Q9UN81 338 aa24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 STXBP5LQ9Y2K9 1186 aa24.86■■□□□ 1.57
SMARCD1-203ENST00000547247 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.85■■□□□ 1.57
SMARCD1-203ENST00000547247 LILRB3O75022 631 aa24.85■■□□□ 1.57
SMARCD1-203ENST00000547247 COPB1P53618 953 aaKnown RBP24.85■■□□□ 1.57
SMARCD1-203ENST00000547247 WSCD1Q658N2 575 aa24.85■■□□□ 1.57
SMARCD1-203ENST00000547247 PRSS55Q6UWB4 352 aaPredicted RBP24.85■■□□□ 1.57
SMARCD1-203ENST00000547247 LNX1Q8TBB1 728 aaPredicted RBP24.85■■□□□ 1.57
SMARCD1-203ENST00000547247 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.85■■□□□ 1.57
SMARCD1-203ENST00000547247 PCDHGC5Q9Y5F6 944 aa24.85■■□□□ 1.57
SMARCD1-203ENST00000547247 MTCH2Q9Y6C9 303 aa24.85■■□□□ 1.57
SMARCD1-203ENST00000547247 COL6A3P12111 3177 aa24.85■■□□□ 1.57
SMARCD1-203ENST00000547247 GTPBP10A4D1E9 387 aaKnown RBP24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 C2orf71A6NGG8 1288 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 HIDE1A8MVS5 230 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 MRPL58Q14197 206 aaKnown RBP24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 PSMD5Q16401 504 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 SOWAHAQ2M3V2 549 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 OVOS1Q6IE37 1185 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 GBP6Q6ZN66 633 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 TMEM86AQ8N2M4 240 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 PDCL2Q8N4E4 241 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 RNF214Q8ND24 703 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 EHBP1Q8NDI1 1231 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 APOBEC3GQ9HC16 384 aaKnown RBP24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 POLIQ9UNA4 740 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 MYO7AQ13402 2215 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 H7C4K7 107 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 OAZ2O95190 189 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 CREMQ03060 361 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 ZNF280DQ6N043 979 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 LIMS2Q7Z4I7 341 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 LMO3Q8TAP4 145 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 SPATA18Q8TC71 538 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 RXFP1Q9HBX9 757 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 GCNT4Q9P109 453 aa24.84■■□□□ 1.57
SMARCD1-203ENST00000547247 SLC34A2O95436 690 aa24.83■■□□□ 1.57
SMARCD1-203ENST00000547247 FAM163BP0C2L3 166 aa24.83■■□□□ 1.57
SMARCD1-203ENST00000547247 EXOC3L4Q17RC7 722 aa24.83■■□□□ 1.57
SMARCD1-203ENST00000547247 APTXQ7Z2E3 356 aaKnown RBP24.83■■□□□ 1.57
SMARCD1-203ENST00000547247 ADGRF2Q8IZF7 708 aa24.83■■□□□ 1.57
SMARCD1-203ENST00000547247 PPP2R3CQ969Q6 453 aa24.83■■□□□ 1.57
SMARCD1-203ENST00000547247 FAXDC2Q96IV6 333 aa24.83■■□□□ 1.57
SMARCD1-203ENST00000547247 CRACR2AQ9BSW2 395 aa24.83■■□□□ 1.57
SMARCD1-203ENST00000547247 EMILIN2Q9BXX0 1053 aa24.83■■□□□ 1.57
SMARCD1-203ENST00000547247 NIF3L1Q9GZT8 377 aa24.83■■□□□ 1.57
SMARCD1-203ENST00000547247 NSUN3Q9H649 340 aaKnown RBP24.83■■□□□ 1.57
SMARCD1-203ENST00000547247 FNIP2Q9P278 1114 aa24.83■■□□□ 1.57
SMARCD1-203ENST00000547247 MTRRQ9UBK8 725 aa24.83■■□□□ 1.57
SMARCD1-203ENST00000547247 BACE2Q9Y5Z0 518 aa24.83■■□□□ 1.57
SMARCD1-203ENST00000547247 TACC1O75410 805 aa24.82■■□□□ 1.56
SMARCD1-203ENST00000547247 CTXN3Q4LDR2 81 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms