RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 IWS1Q96ST2 819 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 TRIM55Q9BYV6 548 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 OSBPL8Q9BZF1 889 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 DCLK3Q9C098 648 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 UBE2TQ9NPD8 197 aaPredicted RBP11.3□□□□□ -0.6
NPAS3-205ENST00000547068 KCNQ5Q9NR82 932 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 TBC1D30Q9Y2I9 924 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 A6NJR5 290 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 YDJCA8MPS7 323 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 RNASEH1O60930 286 aaKnown RBP11.3□□□□□ -0.6
NPAS3-205ENST00000547068 ATP6V1G1O75348 118 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 RAD17O75943 681 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 ASLP04424 464 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 LDHCP07864 332 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 RFX1P22670 979 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 CRABP2P29373 138 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 ARFIP2P53365 341 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 TDRPQ86YL5 185 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 MAPKAPK5Q8IW41 473 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 CCDC89Q8N998 374 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.3□□□□□ -0.6
NPAS3-205ENST00000547068 PRR11Q96HE9 360 aaPredicted RBP11.3□□□□□ -0.6
NPAS3-205ENST00000547068 NAP1L4Q99733 375 aaKnown RBP11.3□□□□□ -0.6
NPAS3-205ENST00000547068 ADAM33Q9BZ11 813 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 SAYSD1Q9NPB0 183 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 FBXO6Q9NRD1 293 aaPredicted RBP11.3□□□□□ -0.6
NPAS3-205ENST00000547068 NDE1Q9NXR1 346 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 FRMD4BQ9Y2L6 1034 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 hCG_2014768A0A024R1R8 64 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 A0A1W2PPM1 405 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 SFI1A8K8P3 1242 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 F8W8V4 182 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 BAG2O95816 211 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 RARBP10826 455 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 PLS3P13797 630 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 VAV1P15498 845 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 BPIFB4P59827 614 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 AP2B1P63010 937 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 CDC16Q13042 620 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 CIAPIN1Q6FI81 312 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 CCDC174Q6PII3 467 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 NSMFQ6X4W1 530 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 MYLK4Q86YV6 388 aaPredicted RBP11.29□□□□□ -0.6
NPAS3-205ENST00000547068 ERMNQ8TAM6 284 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 LENG1Q96BZ8 264 aaPredicted RBP11.29□□□□□ -0.6
NPAS3-205ENST00000547068 ZNF653Q96CK0 615 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 PCDHB18PQ96TA0 734 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 MKNK1Q9BUB5 465 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 SUDS3Q9H7L9 328 aaPredicted RBP11.29□□□□□ -0.6
NPAS3-205ENST00000547068 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.29□□□□□ -0.6
NPAS3-205ENST00000547068 DNAJC6O75061 913 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 TMCC1O94876 653 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 ITGA2BP08514 1039 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 KRT4P19013 534 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 ADRA1DP25100 572 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 ERFP50548 548 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 CYP2J2P51589 502 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 RAP1GDS1P52306 607 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 SFSWAPQ12872 951 aaKnown RBP11.29□□□□□ -0.6
NPAS3-205ENST00000547068 COG2Q14746 738 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 KRT72Q14CN4 511 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.29□□□□□ -0.6
NPAS3-205ENST00000547068 DACT2Q5SW24 774 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 C6orf163Q5TEZ5 329 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 PCNX4Q63HM2 1172 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 CAPN12Q6ZSI9 719 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 LZICQ8WZA0 190 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 SLC5A5Q92911 643 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 MPP4Q96JB8 637 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 CYTH2Q99418 400 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 TTC1Q99614 292 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 MAK16Q9BXY0 300 aaKnown RBP11.29□□□□□ -0.6
NPAS3-205ENST00000547068 BHMT2Q9H2M3 363 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 GPCPD1Q9NPB8 672 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 ZNF510Q9Y2H8 683 aa11.29□□□□□ -0.6
NPAS3-205ENST00000547068 MTO1Q9Y2Z2 717 aaKnown RBP11.29□□□□□ -0.6
NPAS3-205ENST00000547068 PNMA6FA0A0J9YX94 578 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 CYP1A2P05177 515 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 CCDC166P0CW27 439 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 GZMAP12544 262 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 NMT1P30419 496 aaKnown RBP11.28□□□□□ -0.6
NPAS3-205ENST00000547068 CDK16Q00536 496 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 HP1BP3Q5SSJ5 553 aaPredicted RBP11.28□□□□□ -0.6
NPAS3-205ENST00000547068 C1QTNF12Q5T7M4 302 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 PPP1R18Q6NYC8 613 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 ACAD11Q709F0 780 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 PHLDB2Q86SQ0 1253 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 SLFN12Q8IYM2 578 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 ZCCHC9Q8N567 271 aaKnown RBP11.28□□□□□ -0.6
NPAS3-205ENST00000547068 CCDC110Q8TBZ0 833 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 SKA1Q96BD8 255 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 NMD3Q96D46 503 aaKnown RBP11.28□□□□□ -0.6
NPAS3-205ENST00000547068 DDX27Q96GQ7 796 aaKnown RBP11.28□□□□□ -0.6
NPAS3-205ENST00000547068 TMEM120AQ9BXJ8 343 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 EBF3Q9H4W6 596 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 PSTPIP2Q9H939 334 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 VPS37BQ9H9H4 285 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 CIDEBQ9UHD4 219 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 R3HDM2Q9Y2K5 976 aaKnown RBP11.28□□□□□ -0.6
NPAS3-205ENST00000547068 MAGEC1O60732 1142 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms