RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 IQCKQ8N0W5 287 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 OR6J1Q8NGC5 347 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 WNT8AQ9H1J5 351 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 CACNG4Q9UBN1 327 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 RTP1P59025 263 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 MAMLD1Q13495 774 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 CUL1Q13616 776 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 SLITRK6Q9H5Y7 841 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 LCMT1Q9UIC8 334 aa13.51□□□□□ -0.25
SCAF11-209ENST00000547018 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.51□□□□□ -0.25
SCAF11-209ENST00000547018 RLFQ13129 1914 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 SYNJ2BP-COX16A0A087WUM0 186 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 NDUFAB1O14561 156 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 MAPK13O15264 365 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 PHF2O75151 1096 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 ECEL1O95672 775 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 CYP1A2P05177 515 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 UNGP13051 313 aaPredicted RBP13.5□□□□□ -0.25
SCAF11-209ENST00000547018 ARF4P18085 180 aaPredicted RBP13.5□□□□□ -0.25
SCAF11-209ENST00000547018 COILP38432 576 aaPredicted RBP13.5□□□□□ -0.25
SCAF11-209ENST00000547018 AARSP49588 968 aaKnown RBP eCLIP13.5□□□□□ -0.25
SCAF11-209ENST00000547018 ATP11AP98196 1134 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 CCDC62Q6P9F0 684 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 ZNF365Q70YC5 407 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 CATSPER4Q7RTX7 472 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 RASGEF1CQ8N431 466 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 HSPH1Q92598 858 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 CALR3Q96L12 384 aaKnown RBP13.5□□□□□ -0.25
SCAF11-209ENST00000547018 TWNKQ96RR1 684 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 DDX23Q9BUQ8 820 aaKnown RBP13.5□□□□□ -0.25
SCAF11-209ENST00000547018 NIF3L1Q9GZT8 377 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 MROH8Q9H579 483 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 CDHR5Q9HBB8 845 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 COX16Q9P0S2 106 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 UVRAGQ9P2Y5 699 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 CEP83Q9Y592 693 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 IGKV6D-21A0A0A0MT36 114 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 GLTPD2A6NH11 291 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 E7EVH7 732 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 ACKR2O00590 384 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 PDGFRBP09619 1106 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 IRAK1P51617 712 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 NRLP54845 237 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 HUNKP57058 714 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 PSMC1P62191 440 aaKnown RBP13.5□□□□□ -0.25
SCAF11-209ENST00000547018 ALS2CLQ60I27 953 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 USP50Q70EL3 339 aaPredicted RBP13.5□□□□□ -0.25
SCAF11-209ENST00000547018 ANKS1BQ7Z6G8 1248 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 RNF169Q8NCN4 708 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.5□□□□□ -0.25
SCAF11-209ENST00000547018 CAVIN3Q969G5 261 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 KIF12Q96FN5 646 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 C9orf72Q96LT7 481 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 PCDHA3Q9Y5H8 950 aa13.5□□□□□ -0.25
SCAF11-209ENST00000547018 ASB14A6NK59 587 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 F5H423 210 aaPredicted RBP13.49□□□□□ -0.25
SCAF11-209ENST00000547018 ASS1P00966 412 aaKnown RBP13.49□□□□□ -0.25
SCAF11-209ENST00000547018 ZBTB48P10074 688 aaPredicted RBP13.49□□□□□ -0.25
SCAF11-209ENST00000547018 PHKA2P46019 1235 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 ARHGAP1Q07960 439 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 CALN1Q9BXU9 219 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 MIS12Q9H081 205 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 PNMA3Q9UL41 463 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 SNX9Q9Y5X1 595 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 GOLGA8KD6RF30 607 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 M0QYV0 167 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 TRIM66O15016 1216 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 CAND2O75155 1236 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 GH1P01241 217 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 MOGSQ13724 837 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 SGSM1Q2NKQ1 1148 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 DENND2CQ68D51 928 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 C11orf63Q6NUN7 778 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 C15orf39Q6ZRI6 1047 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 TMC3Q7Z5M5 1100 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 FAM114A2Q9NRY5 505 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 NPTXRO95502 500 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 HOXC6P09630 235 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 PSMA2P25787 234 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 RFC1P35251 1148 aaPredicted RBP13.49□□□□□ -0.25
SCAF11-209ENST00000547018 ZNF844Q08AG5 666 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 CCL14Q16627 93 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 LONRF1Q17RB8 773 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 FAM47CQ5HY64 1035 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 ENOSF1Q7L5Y1 443 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 GPR142Q7Z601 462 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 C1orf127Q8N9H9 656 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 NETO2Q8NC67 525 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 EPS8L3Q8TE67 593 aaKnown RBP13.49□□□□□ -0.25
SCAF11-209ENST00000547018 PLVAPQ9BX97 442 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 OSBPL8Q9BZF1 889 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 SNTG2Q9NY99 539 aa13.49□□□□□ -0.25
SCAF11-209ENST00000547018 WDR81Q562E7 1941 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 PPEF2O14830 753 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 KIAA0391O15091 583 aaKnown RBP13.48□□□□□ -0.25
SCAF11-209ENST00000547018 SMPD1P17405 629 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 PMS2P54278 862 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 YARSP54577 528 aaKnown RBP13.48□□□□□ -0.25
SCAF11-209ENST00000547018 NFX1Q12986 1120 aaKnown RBP13.48□□□□□ -0.25
SCAF11-209ENST00000547018 SMAD1Q15797 465 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms