RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 C3orf36Q3SXR2 165 aa5.59□□□□□ -1.51
CCDC38-204ENST00000546816 CLNKQ7Z7G1 428 aa5.59□□□□□ -1.51
CCDC38-204ENST00000546816 AMIGO2Q86SJ2 522 aa5.59□□□□□ -1.51
CCDC38-204ENST00000546816 HDAC10Q969S8 669 aa5.59□□□□□ -1.51
CCDC38-204ENST00000546816 TMX3Q96JJ7 454 aa5.59□□□□□ -1.51
CCDC38-204ENST00000546816 PGBD1Q96JS3 809 aa5.59□□□□□ -1.51
CCDC38-204ENST00000546816 MRGPRX4Q96LA9 322 aa5.59□□□□□ -1.51
CCDC38-204ENST00000546816 TDP1Q9NUW8 608 aa5.59□□□□□ -1.51
CCDC38-204ENST00000546816 SAP30BPQ9UHR5 308 aaKnown RBP5.59□□□□□ -1.51
CCDC38-204ENST00000546816 ZNF804BA4D1E1 1349 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 WDR27A2RRH5 827 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 KLHL33A6NCF5 533 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 LINC00473A8K010 186 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 GABRDO14764 452 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 SGTAO43765 313 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 HAUS5O94927 633 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 MYBL2P10244 700 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 CDK11BP21127 795 aaKnown RBP5.58□□□□□ -1.52
CCDC38-204ENST00000546816 TFF2Q03403 129 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 FPGSQ05932 587 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 FLYWCH1Q4VC44 716 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 PABPC1LQ4VXU2 614 aaKnown RBP5.58□□□□□ -1.52
CCDC38-204ENST00000546816 UTP14CQ5TAP6 766 aaKnown RBP5.58□□□□□ -1.52
CCDC38-204ENST00000546816 MIGA2Q7L4E1 593 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 RSPH3Q86UC2 560 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 IL17RDQ8NFM7 739 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 MYCBPAPQ8TBZ2 947 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 COA7Q96BR5 231 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 NEU2Q9Y3R4 380 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 PCDHB1Q9Y5F3 818 aa5.58□□□□□ -1.52
CCDC38-204ENST00000546816 CCDC154A6NI56 674 aa5.57□□□□□ -1.52
CCDC38-204ENST00000546816 AGFG2O95081 481 aa5.57□□□□□ -1.52
CCDC38-204ENST00000546816 MTHFD1P11586 935 aaKnown RBP5.57□□□□□ -1.52
CCDC38-204ENST00000546816 SLC16A1P53985 500 aa5.57□□□□□ -1.52
CCDC38-204ENST00000546816 KRT85P78386 507 aa5.57□□□□□ -1.52
CCDC38-204ENST00000546816 EIF2B5Q13144 721 aaKnown RBP5.57□□□□□ -1.52
CCDC38-204ENST00000546816 DYRK1AQ13627 763 aa5.57□□□□□ -1.52
CCDC38-204ENST00000546816 ATP2B3Q16720 1220 aa5.57□□□□□ -1.52
CCDC38-204ENST00000546816 CD300EQ496F6 205 aaPredicted RBP5.57□□□□□ -1.52
CCDC38-204ENST00000546816 C11orf87Q6NUJ2 197 aa5.57□□□□□ -1.52
CCDC38-204ENST00000546816 TOR1AIP2Q8NFQ8 470 aa5.57□□□□□ -1.52
CCDC38-204ENST00000546816 TEKT5Q96M29 485 aa5.57□□□□□ -1.52
CCDC38-204ENST00000546816 SERPINB13Q9UIV8 391 aa5.57□□□□□ -1.52
CCDC38-204ENST00000546816 LINC01548A6NM66 108 aa5.56□□□□□ -1.52
CCDC38-204ENST00000546816 KCNAB3O43448 404 aa5.56□□□□□ -1.52
CCDC38-204ENST00000546816 XPOTO43592 962 aaKnown RBP5.56□□□□□ -1.52
CCDC38-204ENST00000546816 KATNA1O75449 491 aa5.56□□□□□ -1.52
CCDC38-204ENST00000546816 CHRM2P08172 466 aa5.56□□□□□ -1.52
CCDC38-204ENST00000546816 EVA1CP58658 441 aa5.56□□□□□ -1.52
CCDC38-204ENST00000546816 ITKQ08881 620 aa5.56□□□□□ -1.52
CCDC38-204ENST00000546816 ODF1Q14990 250 aa5.56□□□□□ -1.52
CCDC38-204ENST00000546816 LLGL1Q15334 1064 aa5.56□□□□□ -1.52
CCDC38-204ENST00000546816 RNF187Q5TA31 235 aaPredicted RBP5.56□□□□□ -1.52
CCDC38-204ENST00000546816 TMPRSS9Q7Z410 1059 aa5.56□□□□□ -1.52
CCDC38-204ENST00000546816 VGLL2Q8N8G2 317 aa5.56□□□□□ -1.52
CCDC38-204ENST00000546816 PRPF38AQ8NAV1 312 aaKnown RBP5.56□□□□□ -1.52
CCDC38-204ENST00000546816 SEMA6DQ8NFY4 1073 aa5.56□□□□□ -1.52
CCDC38-204ENST00000546816 KAT5Q92993 513 aa5.56□□□□□ -1.52
CCDC38-204ENST00000546816 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.56□□□□□ -1.52
CCDC38-204ENST00000546816 SLC45A2Q9UMX9 530 aa5.56□□□□□ -1.52
CCDC38-204ENST00000546816 SHTN1A0MZ66 631 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 VWC2LB2RUY7 222 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 IKBKBO14920 756 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 TP73O15350 636 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 SLC43A1O75387 559 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 SUN1O94901 812 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 ANXA11P50995 505 aaKnown RBP5.55□□□□□ -1.52
CCDC38-204ENST00000546816 HNRNPMP52272 730 aaKnown RBP eCLIP5.55□□□□□ -1.52
CCDC38-204ENST00000546816 KIF23Q02241 960 aaPredicted RBP5.55□□□□□ -1.52
CCDC38-204ENST00000546816 TLE1Q04724 770 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 MTX3Q5HYI7 312 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 ADGRG5Q8IZF4 528 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 LRIG1Q96JA1 1093 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 CLPTM1LQ96KA5 538 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 KLHL32Q96NJ5 620 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 HAPLN3Q96S86 360 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 JKAMPQ9P055 326 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 ST3GAL5Q9UNP4 418 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 CDYLQ9Y232 598 aa5.55□□□□□ -1.52
CCDC38-204ENST00000546816 TNKSO95271 1327 aa5.54□□□□□ -1.52
CCDC38-204ENST00000546816 WASHC2CQ9Y4E1 1318 aa5.54□□□□□ -1.52
CCDC38-204ENST00000546816 GCOM1H8Y6P7 765 aaPredicted RBP5.54□□□□□ -1.52
CCDC38-204ENST00000546816 LATS1O95835 1130 aa5.54□□□□□ -1.52
CCDC38-204ENST00000546816 PPP3CBP16298 524 aa5.54□□□□□ -1.52
CCDC38-204ENST00000546816 DSC2Q02487 901 aa5.54□□□□□ -1.52
CCDC38-204ENST00000546816 SLC10A2Q12908 348 aaPredicted RBP5.54□□□□□ -1.52
CCDC38-204ENST00000546816 FAM50AQ14320 339 aaKnown RBP5.54□□□□□ -1.52
CCDC38-204ENST00000546816 RAB39AQ14964 217 aa5.54□□□□□ -1.52
CCDC38-204ENST00000546816 ZNF782Q6ZMW2 699 aaPredicted RBP5.54□□□□□ -1.52
CCDC38-204ENST00000546816 RASAL3Q86YV0 1011 aa5.54□□□□□ -1.52
CCDC38-204ENST00000546816 TMIEQ8NEW7 156 aa5.54□□□□□ -1.52
CCDC38-204ENST00000546816 CALCOCO1Q9P1Z2 691 aa5.54□□□□□ -1.52
CCDC38-204ENST00000546816 CD1AP06126 327 aa5.53□□□□□ -1.52
CCDC38-204ENST00000546816 PRR35P0CG20 571 aa5.53□□□□□ -1.52
CCDC38-204ENST00000546816 NXPH1P58417 271 aa5.53□□□□□ -1.52
CCDC38-204ENST00000546816 MC2RQ01718 297 aa5.53□□□□□ -1.52
CCDC38-204ENST00000546816 ZNF844Q08AG5 666 aa5.53□□□□□ -1.52
CCDC38-204ENST00000546816 HLXQ14774 488 aaPredicted RBP5.53□□□□□ -1.52
CCDC38-204ENST00000546816 ZNF626Q68DY1 528 aa5.53□□□□□ -1.52
CCDC38-204ENST00000546816 ZNF365Q70YC5 407 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms