RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 VRTNQ9H8Y1 702 aa22.02■■□□□ 1.12
HMGA2-211ENST00000545998 BACE2Q9Y5Z0 518 aa22.02■■□□□ 1.12
HMGA2-211ENST00000545998 TBC1D4O60343 1298 aa22.01■■□□□ 1.11
HMGA2-211ENST00000545998 OAZ2O95190 189 aa22.01■■□□□ 1.11
HMGA2-211ENST00000545998 HLA-DRAP01903 254 aa22.01■■□□□ 1.11
HMGA2-211ENST00000545998 MXI1P50539 228 aa22.01■■□□□ 1.11
HMGA2-211ENST00000545998 YWHAHQ04917 246 aaPredicted RBP22.01■■□□□ 1.11
HMGA2-211ENST00000545998 KCNC3Q14003 757 aa22.01■■□□□ 1.11
HMGA2-211ENST00000545998 ZSCAN23Q3MJ62 389 aa22.01■■□□□ 1.11
HMGA2-211ENST00000545998 CBWD6Q4V339 395 aa22.01■■□□□ 1.11
HMGA2-211ENST00000545998 CBWD3Q5JTY5 395 aa22.01■■□□□ 1.11
HMGA2-211ENST00000545998 CBWD5Q5RIA9 395 aa22.01■■□□□ 1.11
HMGA2-211ENST00000545998 EFHBQ8N7U6 833 aa22.01■■□□□ 1.11
HMGA2-211ENST00000545998 TAS1R2Q8TE23 839 aa22.01■■□□□ 1.11
HMGA2-211ENST00000545998 DSEQ9UL01 958 aa22.01■■□□□ 1.11
HMGA2-211ENST00000545998 SNX9Q9Y5X1 595 aa22.01■■□□□ 1.11
HMGA2-211ENST00000545998 C5orf42Q9H799 3197 aa22.01■■□□□ 1.11
HMGA2-211ENST00000545998 MTCL1Q9Y4B5 1905 aaKnown RBP22■■□□□ 1.11
HMGA2-211ENST00000545998 H7C4K7 107 aa22■■□□□ 1.11
HMGA2-211ENST00000545998 NCK2O43639 380 aa22■■□□□ 1.11
HMGA2-211ENST00000545998 KLRC2P26717 231 aa22■■□□□ 1.11
HMGA2-211ENST00000545998 NDUFV1P49821 464 aa22■■□□□ 1.11
HMGA2-211ENST00000545998 CTC1Q2NKJ3 1217 aa22■■□□□ 1.11
HMGA2-211ENST00000545998 ANO6Q4KMQ2 910 aa22■■□□□ 1.11
HMGA2-211ENST00000545998 RSPO2Q6UXX9 243 aaPredicted RBP22■■□□□ 1.11
HMGA2-211ENST00000545998 LIMS2Q7Z4I7 341 aa22■■□□□ 1.11
HMGA2-211ENST00000545998 L1RE1Q9UN81 338 aa22■■□□□ 1.11
HMGA2-211ENST00000545998 NFE2L3Q9Y4A8 694 aa22■■□□□ 1.11
HMGA2-211ENST00000545998 FSD2A1L4K1 749 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 ADAM12O43184 909 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 ADH1AP07327 375 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 PIK3CAP42336 1068 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 ADAM15Q13444 863 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 WSCD1Q658N2 575 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 OVOS1Q6IE37 1185 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 TOP6BLQ8N6T0 577 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 VN1R2Q8NFZ6 395 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 LINC01565O15544 149 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 HUS1O60921 280 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 GLP2RO95838 553 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 ASS1P00966 412 aaKnown RBP21.99■■□□□ 1.11
HMGA2-211ENST00000545998 CLCN4P51793 760 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 SOWAHAQ2M3V2 549 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 SGSM1Q2NKQ1 1148 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 ZNF699Q32M78 642 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 WDR72Q3MJ13 1102 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 CTXN3Q4LDR2 81 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 SLC8B1Q6J4K2 584 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 ZNF280DQ6N043 979 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 PPFIBP1Q86W92 1011 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 GLYCTKQ8IVS8 523 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 FAM114A1Q8IWE2 563 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 PDCL2Q8N4E4 241 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 FBXL13Q8NEE6 735 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 SLC22A17Q8WUG5 538 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 TAF4BQ92750 862 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 PABPC5Q96DU9 382 aaKnown RBP21.99■■□□□ 1.11
HMGA2-211ENST00000545998 SAMSN1Q9NSI8 373 aaKnown RBP21.99■■□□□ 1.11
HMGA2-211ENST00000545998 FBXL5Q9UKA1 691 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 COQ4Q9Y3A0 265 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 HCFC2Q9Y5Z7 792 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 CDY1Q9Y6F8 540 aa21.99■■□□□ 1.11
HMGA2-211ENST00000545998 OR1D2P34982 312 aa21.98■■□□□ 1.11
HMGA2-211ENST00000545998 FMO5P49326 533 aa21.98■■□□□ 1.11
HMGA2-211ENST00000545998 RBM10P98175 930 aaKnown RBP21.98■■□□□ 1.11
HMGA2-211ENST00000545998 MYL5Q02045 173 aa21.98■■□□□ 1.11
HMGA2-211ENST00000545998 DPH6Q7L8W6 267 aa21.98■■□□□ 1.11
HMGA2-211ENST00000545998 METTL23Q86XA0 190 aa21.98■■□□□ 1.11
HMGA2-211ENST00000545998 TMEM86AQ8N2M4 240 aa21.98■■□□□ 1.11
HMGA2-211ENST00000545998 SEMA4DQ92854 862 aa21.98■■□□□ 1.11
HMGA2-211ENST00000545998 ELMO3Q96BJ8 720 aa21.98■■□□□ 1.11
HMGA2-211ENST00000545998 BPIFA3Q9BQP9 254 aa21.98■■□□□ 1.11
HMGA2-211ENST00000545998 NAT10Q9H0A0 1025 aaKnown RBP21.98■■□□□ 1.11
HMGA2-211ENST00000545998 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.98■■□□□ 1.11
HMGA2-211ENST00000545998 PMM2O15305 246 aa21.97■■□□□ 1.11
HMGA2-211ENST00000545998 C1RP00736 705 aa21.97■■□□□ 1.11
HMGA2-211ENST00000545998 KCNH2Q12809 1159 aa21.97■■□□□ 1.11
HMGA2-211ENST00000545998 SKIV2LQ15477 1246 aaKnown RBP21.97■■□□□ 1.11
HMGA2-211ENST00000545998 HSP90AA4PQ58FG1 418 aa21.97■■□□□ 1.11
HMGA2-211ENST00000545998 LLGL2Q6P1M3 1020 aa21.97■■□□□ 1.11
HMGA2-211ENST00000545998 TMEM184AQ6ZMB5 413 aa21.97■■□□□ 1.11
HMGA2-211ENST00000545998 RTP3Q9BQQ7 232 aa21.97■■□□□ 1.11
HMGA2-211ENST00000545998 OXCT2Q9BYC2 517 aaPredicted RBP21.97■■□□□ 1.11
HMGA2-211ENST00000545998 RAB20Q9NX57 234 aa21.97■■□□□ 1.11
HMGA2-211ENST00000545998 TGM5O43548 720 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 LRRN2O75325 713 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 EPCAMP16422 314 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 TNNC1P63316 161 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 RAB33AQ14088 237 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 ZNF667Q5HYK9 610 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 CDKAL1Q5VV42 579 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 SPOPLQ6IQ16 392 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 LILRA6Q6PI73 481 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 PALB2Q86YC2 1186 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 CREBRFQ8IUR6 639 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 ADGRF2Q8IZF7 708 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 SPATA18Q8TC71 538 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 MMS19Q96T76 1030 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 PI4K2AQ9BTU6 479 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 CLDND1Q9NY35 253 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms