RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 SPP2Q13103 211 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 MAMLD1Q13495 774 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 MTMR1Q13613 665 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 TSNAXIP1Q2TAA8 658 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 EFHC2Q5JST6 749 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 FAM182BQ5T319 152 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 LRRC38Q5VT99 294 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 HHATQ5VTY9 493 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 SLC39A4Q6P5W5 647 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 CENPUQ71F23 418 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 MCF2L2Q86YR7 1114 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 SAMD3Q8N6K7 520 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 CPA5Q8WXQ8 436 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 POMGNT1Q8WZA1 660 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 MASTLQ96GX5 879 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 TUBB6Q9BUF5 446 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 TDRD3Q9H7E2 651 aaKnown RBP9.25□□□□□ -0.93
TDP1-204ENST00000545686 GPRC5CQ9NQ84 441 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 KMT5AQ9NQR1 393 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 IP6K2Q9UHH9 426 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 DOCK5Q9H7D0 1870 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 WDR64B1ANS9 1081 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 PECAM1P16284 738 aaPredicted RBP9.25□□□□□ -0.93
TDP1-204ENST00000545686 RPA3P35244 121 aaPredicted RBP9.25□□□□□ -0.93
TDP1-204ENST00000545686 RAD23BP54727 409 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 RTP1P59025 263 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 KRT76Q01546 638 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 ADCY1Q08828 1119 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 PKN2Q16513 984 aaKnown RBP9.25□□□□□ -0.93
TDP1-204ENST00000545686 BRDTQ58F21 947 aaPredicted RBP9.25□□□□□ -0.93
TDP1-204ENST00000545686 XKR9Q5GH70 373 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 WDR44Q5JSH3 913 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 CCDC125Q86Z20 511 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 NUDCD1Q96RS6 583 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 OSBPL1AQ9BXW6 950 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 DCLRE1BQ9H816 532 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 PCDH9Q9HC56 1237 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 SLCO1B3Q9NPD5 702 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 NKX1-2Q9UD57 310 aaPredicted RBP9.25□□□□□ -0.93
TDP1-204ENST00000545686 GRID1Q9ULK0 1009 aa9.25□□□□□ -0.93
TDP1-204ENST00000545686 POC1B-GALNT4F8VUJ3 575 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 H0YCG3 227 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 HGSO14964 777 aaPredicted RBP9.24□□□□□ -0.93
TDP1-204ENST00000545686 TM9SF1O15321 606 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 ITGAVP06756 1048 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 TROVE2P10155 538 aaKnown RBP eCLIP9.24□□□□□ -0.93
TDP1-204ENST00000545686 PTGER2P43116 358 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 UGCGQ16739 394 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 SGSM1Q2NKQ1 1148 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 ZACNQ401N2 412 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 RNASEH2BQ5TBB1 312 aaKnown RBP9.24□□□□□ -0.93
TDP1-204ENST00000545686 PCGF5Q86SE9 256 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 PRUNE1Q86TP1 453 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 LONP2Q86WA8 852 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 ABRAQ8N0Z2 381 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 IL31RAQ8NI17 732 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 SPOCK2Q92563 424 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 NKD2Q969F2 451 aaPredicted RBP9.24□□□□□ -0.93
TDP1-204ENST00000545686 ALKBH8Q96BT7 664 aaKnown RBP9.24□□□□□ -0.93
TDP1-204ENST00000545686 SLITRK1Q96PX8 696 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 SENP7Q9BQF6 1050 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 C11orf70Q9BRQ4 267 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 PARVAQ9NVD7 372 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 PKD2L1Q9P0L9 805 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 COL20A1Q9P218 1284 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 ANKFY1Q9P2R3 1169 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 TCEAL9Q9UHQ7 104 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 ZFP69BQ9UJL9 534 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 CCPG1Q9ULG6 757 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 CNTN6Q9UQ52 1028 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.24□□□□□ -0.93
TDP1-204ENST00000545686 CD58P19256 250 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 MARK3P27448 753 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 PHBP35232 272 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 ARSEP51690 589 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 CCNHP51946 323 aaPredicted RBP9.24□□□□□ -0.93
TDP1-204ENST00000545686 VCPP55072 806 aaKnown RBP9.24□□□□□ -0.93
TDP1-204ENST00000545686 GEMIN4P57678 1058 aaKnown RBP9.24□□□□□ -0.93
TDP1-204ENST00000545686 MRPS9P82933 396 aaKnown RBP9.24□□□□□ -0.93
TDP1-204ENST00000545686 LBRQ14739 615 aaKnown RBP9.24□□□□□ -0.93
TDP1-204ENST00000545686 PSMD6Q15008 389 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 OASLQ15646 514 aaKnown RBP9.24□□□□□ -0.93
TDP1-204ENST00000545686 NLRP9Q7RTR0 991 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 OTOAQ7RTW8 1153 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 FEZF2Q8TBJ5 459 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 KCNV2Q8TDN2 545 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 ZNF75CPQ92670 426 aaPredicted RBP9.24□□□□□ -0.93
TDP1-204ENST00000545686 FRMD8P1Q9BZ68 369 aaPredicted RBP9.24□□□□□ -0.93
TDP1-204ENST00000545686 VPS37BQ9H9H4 285 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 SLC24A3Q9HC58 644 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 TMOD2Q9NZR1 351 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 DNPEPQ9ULA0 475 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 ZNF148Q9UQR1 794 aa9.24□□□□□ -0.93
TDP1-204ENST00000545686 FER1L6Q2WGJ9 1857 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 HNRNPDLO14979 420 aaKnown RBP9.23□□□□□ -0.93
TDP1-204ENST00000545686 TLR3O15455 904 aaKnown RBP9.23□□□□□ -0.93
TDP1-204ENST00000545686 EXTL3O43909 919 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 SKAP2O75563 359 aaPredicted RBP9.23□□□□□ -0.93
TDP1-204ENST00000545686 TSHRP16473 764 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 GM2AP17900 193 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms