RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 NECTIN4Q96NY8 510 aa12.78□□□□□ -0.36
LTBR-214ENST00000545445 TMEM175Q9BSA9 504 aa12.78□□□□□ -0.36
LTBR-214ENST00000545445 CWH43Q9H720 699 aa12.78□□□□□ -0.36
LTBR-214ENST00000545445 INTS13Q9NVM9 706 aa12.78□□□□□ -0.36
LTBR-214ENST00000545445 FANCLQ9NW38 375 aa12.78□□□□□ -0.36
LTBR-214ENST00000545445 MIOSQ9NXC5 875 aa12.78□□□□□ -0.36
LTBR-214ENST00000545445 LIMD1Q9UGP4 676 aa12.78□□□□□ -0.36
LTBR-214ENST00000545445 LZTS1Q9Y250 596 aa12.78□□□□□ -0.36
LTBR-214ENST00000545445 HCFC2Q9Y5Z7 792 aa12.78□□□□□ -0.36
LTBR-214ENST00000545445 KCNJ18B7U540 433 aa12.77□□□□□ -0.37
LTBR-214ENST00000545445 PI15O43692 258 aa12.77□□□□□ -0.37
LTBR-214ENST00000545445 N4BP1O75113 896 aaKnown RBP12.77□□□□□ -0.37
LTBR-214ENST00000545445 TPM2P07951 284 aa12.77□□□□□ -0.37
LTBR-214ENST00000545445 NFICP08651 508 aa12.77□□□□□ -0.37
LTBR-214ENST00000545445 LRPAP1P30533 357 aa12.77□□□□□ -0.37
LTBR-214ENST00000545445 MTIF2P46199 727 aaKnown RBP12.77□□□□□ -0.37
LTBR-214ENST00000545445 AFF1P51825 1210 aaKnown RBP12.77□□□□□ -0.37
LTBR-214ENST00000545445 TFAMQ00059 246 aaKnown RBP12.77□□□□□ -0.37
LTBR-214ENST00000545445 PLCB3Q01970 1234 aa12.77□□□□□ -0.37
LTBR-214ENST00000545445 DSC1Q08554 894 aa12.77□□□□□ -0.37
LTBR-214ENST00000545445 KCNJ12Q14500 433 aa12.77□□□□□ -0.37
LTBR-214ENST00000545445 TCP11X2Q5H9J9 407 aa12.77□□□□□ -0.37
LTBR-214ENST00000545445 RARS2Q5T160 578 aaKnown RBP12.77□□□□□ -0.37
LTBR-214ENST00000545445 DGLUCYQ7Z3D6 616 aa12.77□□□□□ -0.37
LTBR-214ENST00000545445 EFCAB13Q8IY85 973 aa12.77□□□□□ -0.37
LTBR-214ENST00000545445 C12orf76Q8N812 135 aaPredicted RBP12.77□□□□□ -0.37
LTBR-214ENST00000545445 ADAM7Q9H2U9 754 aa12.77□□□□□ -0.37
LTBR-214ENST00000545445 NGRNQ9NPE2 291 aaKnown RBP12.77□□□□□ -0.37
LTBR-214ENST00000545445 SAMSN1Q9NSI8 373 aaKnown RBP12.77□□□□□ -0.37
LTBR-214ENST00000545445 PUF60Q9UHX1 559 aaKnown RBP12.77□□□□□ -0.37
LTBR-214ENST00000545445 ITGA11Q9UKX5 1188 aa12.77□□□□□ -0.37
LTBR-214ENST00000545445 R3HCC1Q9Y3T6 440 aaKnown RBP12.77□□□□□ -0.37
LTBR-214ENST00000545445 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.77□□□□□ -0.37
LTBR-214ENST00000545445 LRRC10BA6NIK2 292 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 LRRIQ3A6PVS8 624 aaPredicted RBP12.76□□□□□ -0.37
LTBR-214ENST00000545445 TULP1O00294 542 aaPredicted RBP12.76□□□□□ -0.37
LTBR-214ENST00000545445 PMM2O15305 246 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 KRT37O76014 449 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 ALDH2P05091 517 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 ZNF18P17022 549 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 CDK11BP21127 795 aaKnown RBP12.76□□□□□ -0.37
LTBR-214ENST00000545445 MTHFRP42898 656 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 ALDH7A1P49419 539 aaKnown RBP12.76□□□□□ -0.37
LTBR-214ENST00000545445 ITIH3Q06033 890 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 CETN1Q12798 172 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 ANGPT1Q15389 498 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 NAB2Q15742 525 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 MAN2A1Q16706 1144 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 DCAF17Q5H9S7 520 aaPredicted RBP12.76□□□□□ -0.37
LTBR-214ENST00000545445 GLRA4Q5JXX5 417 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 TCERG1LQ5VWI1 586 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 TMC7Q7Z402 723 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 CREBRFQ8IUR6 639 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 CCDC105Q8IYK2 499 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 COLGALT2Q8IYK4 626 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 PLEKHO2Q8TD55 490 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 SLC35C1Q96A29 364 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 NRDE2Q9H7Z3 1164 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 TMEM8AQ9HCN3 771 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 DPP3Q9NY33 737 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 CITO14578 2027 aa12.76□□□□□ -0.37
LTBR-214ENST00000545445 P4HA2O15460 535 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 CLASP2O75122 1294 aaKnown RBP12.75□□□□□ -0.37
LTBR-214ENST00000545445 DDHD2O94830 711 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 NPR3P17342 541 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 AOC1P19801 751 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 CA8P35219 290 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 PPM1AP35813 382 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 PNPLA4P41247 253 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 WNT7BP56706 349 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 RBP5P82980 135 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 ZACNQ401N2 412 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 KRT39Q6A163 491 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 DCLRE1AQ6PJP8 1040 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 KCNT2Q6UVM3 1135 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 SV2AQ7L0J3 742 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 TRAPPC11Q7Z392 1133 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 LUZP1Q86V48 1076 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 ZNF280BQ86YH2 543 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 ZDHHC14Q8IZN3 488 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 FEZF2Q8TBJ5 459 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 ZNF558Q96NG5 402 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 TUBGCP2Q9BSJ2 902 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 COLEC11Q9BWP8 271 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 MTMR12Q9C0I1 747 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 CXCL16Q9H2A7 254 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 STK39Q9UEW8 545 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 LIMA1Q9UHB6 759 aaKnown RBP12.75□□□□□ -0.37
LTBR-214ENST00000545445 FAN1Q9Y2M0 1017 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 EPG5Q9HCE0 2579 aa12.75□□□□□ -0.37
LTBR-214ENST00000545445 EP300Q09472 2414 aaPredicted RBP12.74□□□□□ -0.37
LTBR-214ENST00000545445 FNDC1Q4ZHG4 1894 aaPredicted RBP12.74□□□□□ -0.37
LTBR-214ENST00000545445 FRYLO94915 3013 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 ANO9A1A5B4 782 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 C2orf71A6NGG8 1288 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 TMEM189-UBE2V1I3L0A0 370 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 ZC3H11AO75152 810 aaKnown RBP eCLIP12.74□□□□□ -0.37
LTBR-214ENST00000545445 PHACTR2O75167 634 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 AFPP02771 609 aaKnown RBP12.74□□□□□ -0.37
LTBR-214ENST00000545445 C4BPAP04003 597 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms