RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 CASC1Q6TDU7 716 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 ATG14Q6ZNE5 492 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 FAM35AQ86V20 835 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 CELF2-AS1Q8N7Q2 184 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 OR6P1Q8NGX9 317 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 HDAC7Q8WUI4 952 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 DNAJB3Q8WWF6 145 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 CLEC4DQ8WXI8 215 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 TTC9Q92623 222 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 FGF13Q92913 245 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 FERD3LQ96RJ6 166 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 ADAM2Q99965 735 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 PI4K2AQ9BTU6 479 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 PLA2G2FQ9BZM2 168 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 CCDC113Q9H0I3 377 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 SENP2Q9HC62 589 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 BRMS1Q9HCU9 246 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 NAGPAQ9UK23 515 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 SYNPO2Q9UMS6 1093 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 SLC6A14Q9UN76 642 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 GREB1LQ9C091 1923 aaPredicted RBP7.62□□□□□ -1.19
LDHA-223ENST00000545215 EML5Q05BV3 1969 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 CYP2D7A0A087X1C5 515 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 TLX3O43711 291 aaPredicted RBP7.62□□□□□ -1.19
LDHA-223ENST00000545215 ECI2O75521 394 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 LGALS2P05162 132 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 C8AP07357 584 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 ESRRAP11474 423 aaPredicted RBP7.62□□□□□ -1.19
LDHA-223ENST00000545215 CD59P13987 128 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 CPB1P15086 417 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 ENGP17813 658 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 METAP2P50579 478 aaKnown RBP eCLIP7.62□□□□□ -1.195e-10■■□□□ 11.5
LDHA-223ENST00000545215 BCAR1P56945 870 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 UBE3CQ15386 1083 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 STXBP2Q15833 593 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 PERM1Q5SV97 790 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 C12orf60Q5U649 245 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 SLFN13Q68D06 897 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 FOXR1Q6PIV2 292 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 Q6ZS52 159 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 MARCH9Q86YJ5 346 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 TICAM1Q8IUC6 712 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 HDDC3Q8N4P3 179 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 RBBP8NLQ8NC74 664 aaPredicted RBP7.62□□□□□ -1.19
LDHA-223ENST00000545215 GRIN3AQ8TCU5 1115 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 RUFY2Q8WXA3 655 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 MDFIQ99750 246 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 NUSAP1Q9BXS6 441 aaKnown RBP7.62□□□□□ -1.19
LDHA-223ENST00000545215 LRRC4CQ9HCJ2 640 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 AVENQ9NQS1 362 aaPredicted RBP7.62□□□□□ -1.19
LDHA-223ENST00000545215 RBM12Q9NTZ6 932 aaKnown RBP7.62□□□□□ -1.19
LDHA-223ENST00000545215 ZDHHC7Q9NXF8 308 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 MBD1Q9UIS9 605 aaPredicted RBP7.62□□□□□ -1.19
LDHA-223ENST00000545215 SLC4A4Q9Y6R1 1079 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 IGSF9BQ9UPX0 1349 aa7.62□□□□□ -1.19
LDHA-223ENST00000545215 F5P12259 2224 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 NAV3Q8IVL0 2385 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 ABCA2Q9BZC7 2435 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 DENND3A2RUS2 1198 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 EXTL3O43909 919 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 CHGBP05060 677 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 IMPDH2P12268 514 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 TLE3Q04726 772 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 CLCQ05315 142 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 IKQ13123 557 aaPredicted RBP7.61□□□□□ -1.19
LDHA-223ENST00000545215 DDR2Q16832 855 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 TRIM61Q5EBN2 209 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 TSHZ3Q63HK5 1081 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 TMEM173Q86WV6 379 aaPredicted RBP7.61□□□□□ -1.19
LDHA-223ENST00000545215 RILPL2Q969X0 211 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 CAMK1GQ96NX5 476 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 TRPV5Q9NQA5 729 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 ACTR10Q9NZ32 417 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 PLEKHB1Q9UF11 243 aaPredicted RBP7.61□□□□□ -1.19
LDHA-223ENST00000545215 TRIM33Q9UPN9 1127 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 WDR81Q562E7 1941 aa7.61□□□□□ -1.19
LDHA-223ENST00000545215 ADARB2-AS1A8MUL3 147 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 DCLK1O15075 740 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 RNF113AO15541 343 aaKnown RBP7.6□□□□□ -1.19
LDHA-223ENST00000545215 CDC45O75419 566 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 BPNT1O95861 308 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 RPLP2P05387 115 aaKnown RBP7.6□□□□□ -1.19
LDHA-223ENST00000545215 MYBP10242 640 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 BMP4P12644 408 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 GSPT1P15170 499 aaKnown RBP7.6□□□□□ -1.19
LDHA-223ENST00000545215 SDSP20132 328 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 CCNE1P24864 410 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 MLLT6P55198 1093 aaPredicted RBP7.6□□□□□ -1.19
LDHA-223ENST00000545215 PCBP4P57723 403 aaKnown RBP7.6□□□□□ -1.19
LDHA-223ENST00000545215 RPL6Q02878 288 aaKnown RBP7.6□□□□□ -1.19
LDHA-223ENST00000545215 DGKKQ5KSL6 1271 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 CTR9Q6PD62 1173 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 GK5Q6ZS86 529 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 GLRX5Q86SX6 157 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 APPBP2Q92624 585 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 IGSF21Q96ID5 467 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 LPIN3Q9BQK8 851 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 VN1R3Q9BXE9 311 aa7.6□□□□□ -1.19
LDHA-223ENST00000545215 PUS7LQ9H0K6 701 aaKnown RBP7.6□□□□□ -1.19
LDHA-223ENST00000545215 SMG9Q9H0W8 520 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms