RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 SLC39A2Q9NP94 309 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 AGPAT3Q9NRZ7 376 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 HSFX1Q9UBD0 423 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 POLIQ9UNA4 740 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 DCHS1Q96JQ0 3298 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 DENND4AQ7Z401 1863 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 TMEM221A6NGB7 291 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 KPNA7A9QM74 516 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 M0R296 226 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 CYB561D2O14569 222 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 ZNF197O14709 1029 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 CCL16O15467 120 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 TNNC2P02585 160 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 PTPN2P17706 415 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 NDUFA8P51970 172 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 MYO1EQ12965 1108 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 GPR17Q13304 367 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 SNRNP35Q16560 246 aaKnown RBP12.74□□□□□ -0.37
HDAC4-216ENST00000544989 DUOXA2Q1HG44 320 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 PABPC1LQ4VXU2 614 aaKnown RBP12.74□□□□□ -0.37
HDAC4-216ENST00000544989 IQCEQ6IPM2 695 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 GRASPQ7Z6J2 395 aaPredicted RBP12.74□□□□□ -0.37
HDAC4-216ENST00000544989 WDR49Q8IV35 697 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 EFCAB13Q8IY85 973 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 TMEM86AQ8N2M4 240 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 C2orf15Q8WU43 125 aaKnown RBP12.74□□□□□ -0.37
HDAC4-216ENST00000544989 TMEM174Q8WUU8 243 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 HPS3Q969F9 1004 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 FNBP1Q96RU3 617 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 GTPBP4Q9BZE4 634 aaKnown RBP12.74□□□□□ -0.37
HDAC4-216ENST00000544989 IKZF4Q9H2S9 585 aa12.74□□□□□ -0.37
HDAC4-216ENST00000544989 RIF1Q5UIP0 2472 aaKnown RBP12.74□□□□□ -0.37
HDAC4-216ENST00000544989 C2orf16Q68DN1 1984 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-216ENST00000544989 GOLGA8IPA6NC78 632 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 GOLGA8JA6NMD2 632 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 TULP1O00294 542 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-216ENST00000544989 TGFB1I1O43294 461 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 KLRC4O43908 158 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 MICAL2O94851 1124 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 ZNF202O95125 648 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 RPN1P04843 607 aaKnown RBP12.73□□□□□ -0.37
HDAC4-216ENST00000544989 HOXD13P35453 343 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 AP3M2P53677 418 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 ADCY1Q08828 1119 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 TDGQ13569 410 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 KMT5BQ4FZB7 885 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 KRBA2Q6ZNG9 492 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 MTSS1LQ765P7 747 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 GET4Q7L5D6 327 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-216ENST00000544989 NELFCDQ8IXH7 590 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 GRAMD1CQ8IYS0 662 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 DCP1BQ8IZD4 617 aaKnown RBP12.73□□□□□ -0.37
HDAC4-216ENST00000544989 CSGALNACT2Q8N6G5 542 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 C1orf127Q8N9H9 656 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 GLIS3Q8NEA6 775 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 ZNF512Q96ME7 567 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-216ENST00000544989 KCNK12Q9HB15 430 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 PDE11AQ9HCR9 933 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 INTS13Q9NVM9 706 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 GDE1Q9NZC3 331 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 HOOK1Q9UJC3 728 aaKnown RBP12.73□□□□□ -0.37
HDAC4-216ENST00000544989 CDH7Q9ULB5 785 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 CIZ1Q9ULV3 898 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-216ENST00000544989 AGAP1Q9UPQ3 857 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 ASB3Q9Y575 518 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 TIMM13Q9Y5L4 95 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-216ENST00000544989 INSL5Q9Y5Q6 135 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 TECTAO75443 2155 aa12.73□□□□□ -0.37
HDAC4-216ENST00000544989 ANK1P16157 1881 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 VPS13AQ96RL7 3174 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 PDXKO00764 312 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 PPEF2O14830 753 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 SPTLC1O15269 473 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 EXOC3O60645 756 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 HUS1O60921 280 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 RHOBTB3O94955 611 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 ITGB3P05106 788 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 LAMP2P13473 410 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 CASP1P29466 404 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 POLR2BP30876 1174 aaKnown RBP12.72□□□□□ -0.37
HDAC4-216ENST00000544989 ALDH1A3P47895 512 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 CYP2J2P51589 502 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 TSPY1Q01534 308 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 KCNB1Q14721 858 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 PSMD6Q15008 389 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 CYP4A22Q5TCH4 519 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 CBWD2Q8IUF1 395 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 SLC9A9Q8IVB4 645 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 SUGP1Q8IWZ8 645 aaKnown RBP12.72□□□□□ -0.37
HDAC4-216ENST00000544989 PBXIP1Q96AQ6 731 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 MYADMQ96S97 322 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 MTMR12Q9C0I1 747 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 GDAP2Q9NXN4 497 aa12.72□□□□□ -0.37
HDAC4-216ENST00000544989 PTPRZ1P23471 2315 aaPredicted RBP12.72□□□□□ -0.37
HDAC4-216ENST00000544989 MYO10Q9HD67 2058 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 TCHHQ07283 1943 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 CLIC2O15247 247 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 CALUO43852 315 aaPredicted RBP12.71□□□□□ -0.37
HDAC4-216ENST00000544989 N4BP1O75113 896 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms