RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 ZNF658Q5TYW1 1059 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-206ENST00000544964 SLC8B1Q6J4K2 584 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 PHLDB3Q6NSJ2 640 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 CAVIN1Q6NZI2 390 aaKnown RBP13.53□□□□□ -0.24
ACTN1-206ENST00000544964 SLC39A4Q6P5W5 647 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 POTEHQ6S545 545 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 ANKS3Q6ZW76 656 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 ZNF507Q8TCN5 953 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 TCHPQ9BT92 498 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 CCDC94Q9BW85 323 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-206ENST00000544964 CNTN3Q9P232 1028 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 ANKFY1Q9P2R3 1169 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 DNMT3BQ9UBC3 853 aaKnown RBP13.53□□□□□ -0.24
ACTN1-206ENST00000544964 TSC2P49815 1807 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 PODXLO00592 558 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 TBC1D4O60343 1298 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 PIGRP01833 764 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 DCNP07585 359 aaKnown RBP13.52□□□□□ -0.25
ACTN1-206ENST00000544964 MCF2P10911 925 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 GLULP15104 373 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 KCNE1P15382 129 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 BMP6P22004 513 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 GPC5P78333 572 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 ROR1Q01973 937 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 SLC5A9Q2M3M2 681 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 KLHL40Q2TBA0 621 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 PABPC1LQ4VXU2 614 aaKnown RBP13.52□□□□□ -0.25
ACTN1-206ENST00000544964 CCDC183Q5T5S1 534 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 MPZL3Q6UWV2 235 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 ZPBP2Q6X784 338 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 APBB1IPQ7Z5R6 666 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-206ENST00000544964 PJA1Q8NG27 643 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 FOXQ1Q9C009 403 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 HAPLN2Q9GZV7 340 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 TMEM206Q9H813 350 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 TOPORSQ9NS56 1045 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-206ENST00000544964 POLIQ9UNA4 740 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 EXOC7Q9UPT5 735 aa13.52□□□□□ -0.25
ACTN1-206ENST00000544964 ANK1P16157 1881 aa13.51□□□□□ -0.25
ACTN1-206ENST00000544964 UBE4BO95155 1302 aa13.51□□□□□ -0.25
ACTN1-206ENST00000544964 WDR27A2RRH5 827 aa13.51□□□□□ -0.25
ACTN1-206ENST00000544964 TOM1L1O75674 476 aa13.51□□□□□ -0.25
ACTN1-206ENST00000544964 PRCPP42785 496 aa13.51□□□□□ -0.25
ACTN1-206ENST00000544964 YARSP54577 528 aaKnown RBP13.51□□□□□ -0.25
ACTN1-206ENST00000544964 STARD6P59095 220 aa13.51□□□□□ -0.25
ACTN1-206ENST00000544964 BMT2Q1RMZ1 405 aa13.51□□□□□ -0.25
ACTN1-206ENST00000544964 UVSSAQ2YD98 709 aa13.51□□□□□ -0.25
ACTN1-206ENST00000544964 SEZ6Q53EL9 994 aa13.51□□□□□ -0.25
ACTN1-206ENST00000544964 VARS2Q5ST30 1063 aaKnown RBP13.51□□□□□ -0.25
ACTN1-206ENST00000544964 MTSS1LQ765P7 747 aa13.51□□□□□ -0.25
ACTN1-206ENST00000544964 ING5Q8WYH8 240 aa13.51□□□□□ -0.25
ACTN1-206ENST00000544964 C18orf25Q96B23 403 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-206ENST00000544964 DDX23Q9BUQ8 820 aaKnown RBP13.51□□□□□ -0.25
ACTN1-206ENST00000544964 SLC38A7Q9NVC3 462 aa13.51□□□□□ -0.25
ACTN1-206ENST00000544964 ARHGEF37A1IGU5 675 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 STK25O00506 426 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 NRG2O14511 850 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-206ENST00000544964 CLDN3O15551 220 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 TGFB1I1O43294 461 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 TRAPPC3O43617 180 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 LRRN2O75325 713 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 ABLIM3O94929 683 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 RHOP08100 348 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 CD44P16070 742 aaKnown RBP13.5□□□□□ -0.25
ACTN1-206ENST00000544964 RFX1P22670 979 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 NOLC1Q14978 699 aaKnown RBP eCLIP13.5□□□□□ -0.25
ACTN1-206ENST00000544964 KNOP1Q1ED39 458 aaKnown RBP13.5□□□□□ -0.25
ACTN1-206ENST00000544964 SKOR2Q2VWA4 1001 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-206ENST00000544964 RBM43Q6ZSC3 357 aaKnown RBP13.5□□□□□ -0.25
ACTN1-206ENST00000544964 RTL10Q7L3V2 364 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 TMEM130Q8N3G9 435 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 SYAP1Q96A49 352 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-206ENST00000544964 ACAP3Q96P50 834 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 KXD1Q9BQD3 176 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 PCIF1Q9H4Z3 704 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 AVENQ9NQS1 362 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-206ENST00000544964 TUBGCP4Q9UGJ1 667 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 SIT1Q9Y3P8 196 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 TICRRQ7Z2Z1 1910 aa13.5□□□□□ -0.25
ACTN1-206ENST00000544964 SYN3O14994 580 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 CLIC2O15247 247 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 KIF20AO95235 890 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 SEC24AO95486 1093 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 CEBPBP17676 345 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 ADSSP30520 456 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 MCL1Q07820 350 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 MRPL58Q14197 206 aaKnown RBP13.49□□□□□ -0.25
ACTN1-206ENST00000544964 MLF2Q15773 248 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-206ENST00000544964 SLC10A6Q3KNW5 377 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 PRSS36Q5K4E3 855 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 MAML2Q8IZL2 1156 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-206ENST00000544964 ADSSL1Q8N142 457 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 GUF1Q8N442 669 aaKnown RBP13.49□□□□□ -0.25
ACTN1-206ENST00000544964 TRIML1Q8N9V2 468 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 ZSWIM2Q8NEG5 633 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 ZNF461Q8TAF7 563 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 POMGNT1Q8WZA1 660 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 SUSD3Q96L08 255 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 CBWD1Q9BRT8 395 aa13.49□□□□□ -0.25
ACTN1-206ENST00000544964 MSTO1Q9BUK6 570 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms