RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 EFCAB13Q8IY85 973 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 LRRC52Q8N7C0 313 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 RNF169Q8NCN4 708 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 OR5B17Q8NGF7 314 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 OR8K1Q8NGG5 319 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 SP7Q8TDD2 431 aaPredicted RBP10.22□□□□□ -0.77
YBX3-215ENST00000544504 TAS1R2Q8TE23 839 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 SYN2Q92777 582 aaPredicted RBP10.22□□□□□ -0.77
YBX3-215ENST00000544504 ZNF560Q96MR9 790 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 UROC1Q96N76 676 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 SPAG5Q96R06 1193 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 PANX2Q96RD6 677 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 NAA15Q9BXJ9 866 aaKnown RBP10.22□□□□□ -0.77
YBX3-215ENST00000544504 TTYH3Q9C0H2 523 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 GANQ9H2C0 597 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 VRTNQ9H8Y1 702 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 ZDBF2Q9HCK1 2354 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 ARHGEF37A1IGU5 675 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 ARL5CA6NH57 179 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 CLSTN1O94985 981 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 ASS1P00966 412 aaKnown RBP10.21□□□□□ -0.77
YBX3-215ENST00000544504 ITGB3P05106 788 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 KRT19P08727 400 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 LRPAP1P30533 357 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 CASP14P31944 242 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 LTBRP36941 435 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 WNT7BP56706 349 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 POLR2FP61218 127 aaKnown RBP10.21□□□□□ -0.77
YBX3-215ENST00000544504 HTRA4P83105 476 aaPredicted RBP10.21□□□□□ -0.77
YBX3-215ENST00000544504 GPM6BQ13491 265 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 ARID5BQ14865 1188 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 ZNF699Q32M78 642 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 ZNF667Q5HYK9 610 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 LMBRD2Q68DH5 695 aaPredicted RBP10.21□□□□□ -0.77
YBX3-215ENST00000544504 CCDC186Q7Z3E2 898 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 RTN4RL1Q86UN2 441 aaPredicted RBP10.21□□□□□ -0.77
YBX3-215ENST00000544504 PPM1KQ8N3J5 372 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 FBXL6Q8N531 539 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 C1orf127Q8N9H9 656 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 LMO3Q8TAP4 145 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 CPLX3Q8WVH0 158 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 DDX27Q96GQ7 796 aaKnown RBP10.21□□□□□ -0.77
YBX3-215ENST00000544504 GAD1Q99259 594 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 MRPL9Q9BYD2 267 aaKnown RBP10.21□□□□□ -0.77
YBX3-215ENST00000544504 STK33Q9BYT3 514 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 OSBPL7Q9BZF2 842 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 NIF3L1Q9GZT8 377 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 RNF39Q9H2S5 420 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 KLK14Q9P0G3 267 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 DNAJC12Q9UKB3 198 aa10.21□□□□□ -0.77
YBX3-215ENST00000544504 BZW2Q9Y6E2 419 aaKnown RBP10.21□□□□□ -0.77
YBX3-215ENST00000544504 PTPRJQ12913 1337 aa10.21□□□□□ -0.78
YBX3-215ENST00000544504 WDR87Q6ZQQ6 2873 aa10.21□□□□□ -0.78
YBX3-215ENST00000544504 ANK1P16157 1881 aa10.21□□□□□ -0.78
YBX3-215ENST00000544504 MBTPS2O43462 519 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 NOL4O94818 638 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 VNN1O95497 513 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 AMHP03971 560 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 FERP16591 822 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 HNRNPH3P31942 346 aaKnown RBP10.2□□□□□ -0.78
YBX3-215ENST00000544504 MLH1P40692 756 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 STAT1P42224 750 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 NOP14P78316 857 aaKnown RBP10.2□□□□□ -0.78
YBX3-215ENST00000544504 PTPRSQ13332 1948 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 TCTN1Q2MV58 587 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 CTC1Q2NKJ3 1217 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 SV2CQ496J9 727 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 NOMO2Q5JPE7 1267 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 RRAGAQ7L523 313 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 ZFHX4Q86UP3 3567 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 LINC01599Q8WXQ3 324 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 SEMA4DQ92854 862 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 ATOH1Q92858 354 aaPredicted RBP10.2□□□□□ -0.78
YBX3-215ENST00000544504 PPP1R10Q96QC0 940 aaKnown RBP10.2□□□□□ -0.78
YBX3-215ENST00000544504 DNAJC7Q99615 494 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 SPTBN4Q9H254 2564 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 CYP3A43Q9HB55 503 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 SIX2Q9NPC8 291 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 UBE2TQ9NPD8 197 aaPredicted RBP10.2□□□□□ -0.78
YBX3-215ENST00000544504 NLRC4Q9NPP4 1024 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 FAM86C1Q9NVL1 165 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 AGAP1Q9UPQ3 857 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 DNAH14Q0VDD8 3507 aa10.2□□□□□ -0.78
YBX3-215ENST00000544504 ANO9A1A5B4 782 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 PTGESO14684 152 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 MEFVO15553 781 aaPredicted RBP10.19□□□□□ -0.78
YBX3-215ENST00000544504 OFD1O75665 1012 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 FAM163BP0C2L3 166 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 ANXA13P27216 316 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 POLR2BP30876 1174 aaKnown RBP10.19□□□□□ -0.78
YBX3-215ENST00000544504 KLK7P49862 253 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 SCNN1GP51170 649 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 BPIFB4P59827 614 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 MYL6P60660 151 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 TNNC1P63316 161 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 CDK17Q00537 523 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 RNASELQ05823 741 aaKnown RBP10.19□□□□□ -0.78
YBX3-215ENST00000544504 TUSC3Q13454 348 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 SMAD4Q13485 552 aaKnown RBP10.19□□□□□ -0.78
YBX3-215ENST00000544504 CUL2Q13617 745 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms