RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 ZNF341Q9BYN7 854 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 IMPG2Q9BZV3 1241 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 NRDE2Q9H7Z3 1164 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 ARMT1Q9H993 441 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 GALNT9Q9HCQ5 603 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 SLC2A4RGQ9NR83 387 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 HSFX1Q9UBD0 423 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 SLC45A2Q9UMX9 530 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 PCDHA6Q9UN73 950 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 MED16Q9Y2X0 877 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.96□□□□□ -1.94
YBX3-214ENST00000544501 NOX1Q9Y5S8 564 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 PRAMEF33A0A0G2JMD5 474 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 CENPVL1A0A0U1RR11 272 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 ZNF785A8K8V0 405 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 ISM1B1AKI9 464 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 E9PLN8 166 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 GOLIM4O00461 696 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 TPP1O14773 563 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 PRAMEF10O60809 474 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 ZNF202O95125 648 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 ABHD16AO95870 558 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 KCNA2P16389 499 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 RPL17P18621 184 aaKnown RBP2.95□□□□□ -1.94
YBX3-214ENST00000544501 ANXA11P50995 505 aaKnown RBP2.95□□□□□ -1.94
YBX3-214ENST00000544501 VAV2P52735 878 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 ZNF135P52742 658 aaPredicted RBP2.95□□□□□ -1.94
YBX3-214ENST00000544501 ARFIP2P53365 341 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 RPS7P62081 194 aaKnown RBP2.95□□□□□ -1.94
YBX3-214ENST00000544501 GUCY1B3Q02153 619 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 EXOSC9Q06265 439 aaKnown RBP2.95□□□□□ -1.94
YBX3-214ENST00000544501 RESTQ13127 1097 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 DYRK1AQ13627 763 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 HLXQ14774 488 aaPredicted RBP2.95□□□□□ -1.94
YBX3-214ENST00000544501 CNN3Q15417 329 aaKnown RBP2.95□□□□□ -1.94
YBX3-214ENST00000544501 CYP2A13Q16696 494 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 AMOTQ4VCS5 1084 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 ABHD17BQ5VST6 288 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 KCNV1Q6PIU1 500 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 TMPRSS9Q7Z410 1059 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 PPP1R32Q7Z5V6 425 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 CLNKQ7Z7G1 428 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 USP37Q86T82 979 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 GGNQ86UU5 652 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 COLGALT2Q8IYK4 626 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 IL31RAQ8NI17 732 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 POC1BQ8TC44 478 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 PROKR1Q8TCW9 393 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 ANKS1AQ92625 1134 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 SUCLG2Q96I99 432 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 TRIB1Q96RU8 372 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 PRRX2Q99811 253 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 SMOQ99835 787 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 ADAM2Q99965 735 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 VKORC1Q9BQB6 163 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 ZSWIM1Q9BR11 485 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 ALOXE3Q9BYJ1 711 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 KRTAP9-3Q9BYQ3 159 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 TINAGL1Q9GZM7 467 aaPredicted RBP2.95□□□□□ -1.94
YBX3-214ENST00000544501 MMRN2Q9H8L6 949 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 ZMAT3Q9HA38 289 aaKnown RBP2.95□□□□□ -1.94
YBX3-214ENST00000544501 ATP6V0A4Q9HBG4 840 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 SLAMF7Q9NQ25 335 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 DDX21Q9NR30 783 aaKnown RBP eCLIP2.95□□□□□ -1.94
YBX3-214ENST00000544501 CTTNBP2NLQ9P2B4 639 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 DDX20Q9UHI6 824 aaKnown RBP2.95□□□□□ -1.94
YBX3-214ENST00000544501 USP25Q9UHP3 1055 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 TPCN1Q9ULQ1 816 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 CDYLQ9Y232 598 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 MTO1Q9Y2Z2 717 aaKnown RBP2.95□□□□□ -1.94
YBX3-214ENST00000544501 REXO2Q9Y3B8 237 aaKnown RBP2.95□□□□□ -1.94
YBX3-214ENST00000544501 PLEKHM1Q9Y4G2 1056 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 PAXBP1Q9Y5B6 917 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 AATKQ6ZMQ8 1374 aa2.95□□□□□ -1.94
YBX3-214ENST00000544501 SPATA31A3Q5VYP0 1347 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 PIPSLA2A3N6 862 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 CCDC78A2IDD5 438 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 CFAP69A5D8W1 941 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 A6NNZ2 444 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 NPIPB8E9PQR5 432 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 MYO1FO00160 1098 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 POLRMTO00411 1230 aaKnown RBP2.94□□□□□ -1.94
YBX3-214ENST00000544501 CAND2O75155 1236 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 SUN1O94901 812 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 ADH4P08319 380 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 MYBP10242 640 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 PIM1P11309 404 aaPredicted RBP2.94□□□□□ -1.94
YBX3-214ENST00000544501 C6P13671 934 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 NPR1P16066 1061 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 RHCEP18577 417 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 HDCP19113 662 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 EN2P19622 333 aaPredicted RBP2.94□□□□□ -1.94
YBX3-214ENST00000544501 FDXRP22570 491 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 PHKA1P46020 1223 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 KCNJ5P48544 419 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 ZXDAP98168 799 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 RHDQ02161 417 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 ABHD18Q0P651 414 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 POLD3Q15054 466 aaPredicted RBP2.94□□□□□ -1.94
YBX3-214ENST00000544501 PTPAQ15257 358 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms