RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 SLC39A2Q9NP94 309 aa25.11■■□□□ 1.61
CHFR-222ENST00000544093 AVENQ9NQS1 362 aaPredicted RBP25.11■■□□□ 1.61
CHFR-222ENST00000544093 R3HCC1Q9Y3T6 440 aaKnown RBP25.11■■□□□ 1.61
CHFR-222ENST00000544093 INSL5Q9Y5Q6 135 aa25.11■■□□□ 1.61
CHFR-222ENST00000544093 TSC2P49815 1807 aa25.11■■□□□ 1.61
CHFR-222ENST00000544093 DOCK6Q96HP0 2047 aa25.1■■□□□ 1.61
CHFR-222ENST00000544093 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.1■■□□□ 1.61
CHFR-222ENST00000544093 KPNA7A9QM74 516 aa25.1■■□□□ 1.61
CHFR-222ENST00000544093 TGFB1I1O43294 461 aa25.1■■□□□ 1.61
CHFR-222ENST00000544093 TMEM191BP0C7N4 346 aa25.1■■□□□ 1.61
CHFR-222ENST00000544093 PTPN2P17706 415 aa25.1■■□□□ 1.61
CHFR-222ENST00000544093 KNOP1Q1ED39 458 aaKnown RBP25.1■■□□□ 1.61
CHFR-222ENST00000544093 C12orf56Q8IXR9 622 aa25.1■■□□□ 1.61
CHFR-222ENST00000544093 GRAMD1CQ8IYS0 662 aa25.1■■□□□ 1.61
CHFR-222ENST00000544093 THEM5Q8N1Q8 247 aa25.1■■□□□ 1.61
CHFR-222ENST00000544093 ZSWIM2Q8NEG5 633 aa25.1■■□□□ 1.61
CHFR-222ENST00000544093 ASIC4Q96FT7 647 aa25.1■■□□□ 1.61
CHFR-222ENST00000544093 ANKRD36BP1Q96IX9 119 aa25.1■■□□□ 1.61
CHFR-222ENST00000544093 PDE11AQ9HCR9 933 aa25.1■■□□□ 1.61
CHFR-222ENST00000544093 HSFX1Q9UBD0 423 aa25.1■■□□□ 1.61
CHFR-222ENST00000544093 CDH7Q9ULB5 785 aa25.1■■□□□ 1.61
CHFR-222ENST00000544093 TULP1O00294 542 aaPredicted RBP25.09■■□□□ 1.61
CHFR-222ENST00000544093 CYB561D2O14569 222 aa25.09■■□□□ 1.61
CHFR-222ENST00000544093 NDUFA8P51970 172 aa25.09■■□□□ 1.61
CHFR-222ENST00000544093 PLD1Q13393 1074 aa25.09■■□□□ 1.61
CHFR-222ENST00000544093 SNRNP35Q16560 246 aaKnown RBP25.09■■□□□ 1.61
CHFR-222ENST00000544093 SUGP1Q8IWZ8 645 aaKnown RBP25.09■■□□□ 1.61
CHFR-222ENST00000544093 C1orf127Q8N9H9 656 aa25.09■■□□□ 1.61
CHFR-222ENST00000544093 FSIP1Q8NA03 581 aa25.09■■□□□ 1.61
CHFR-222ENST00000544093 XXYLT1Q8NBI6 393 aa25.09■■□□□ 1.61
CHFR-222ENST00000544093 CHAMP1Q96JM3 812 aa25.09■■□□□ 1.61
CHFR-222ENST00000544093 DNMT3BQ9UBC3 853 aaKnown RBP25.09■■□□□ 1.61
CHFR-222ENST00000544093 KLRC4O43908 158 aa25.08■■□□□ 1.61
CHFR-222ENST00000544093 PRPF40AO75400 957 aaKnown RBP25.08■■□□□ 1.61
CHFR-222ENST00000544093 TNNC2P02585 160 aa25.08■■□□□ 1.61
CHFR-222ENST00000544093 ITGB3P05106 788 aa25.08■■□□□ 1.61
CHFR-222ENST00000544093 POLR2BP30876 1174 aaKnown RBP25.08■■□□□ 1.61
CHFR-222ENST00000544093 RBP5P82980 135 aa25.08■■□□□ 1.61
CHFR-222ENST00000544093 SMARCB1Q12824 385 aa25.08■■□□□ 1.61
CHFR-222ENST00000544093 IQCEQ6IPM2 695 aa25.08■■□□□ 1.61
CHFR-222ENST00000544093 RNF19BQ6ZMZ0 732 aa25.08■■□□□ 1.61
CHFR-222ENST00000544093 CBWD2Q8IUF1 395 aa25.08■■□□□ 1.61
CHFR-222ENST00000544093 NELFCDQ8IXH7 590 aa25.08■■□□□ 1.61
CHFR-222ENST00000544093 LEMD2Q8NC56 503 aa25.08■■□□□ 1.61
CHFR-222ENST00000544093 KCNH6Q9H252 994 aa25.08■■□□□ 1.61
CHFR-222ENST00000544093 DUSP12Q9UNI6 340 aa25.08■■□□□ 1.61
CHFR-222ENST00000544093 AGAP1Q9UPQ3 857 aa25.08■■□□□ 1.61
CHFR-222ENST00000544093 ZNF197O14709 1029 aa25.07■■□□□ 1.6
CHFR-222ENST00000544093 KIF20AO95235 890 aa25.07■■□□□ 1.6
CHFR-222ENST00000544093 SEC24AO95486 1093 aa25.07■■□□□ 1.6
CHFR-222ENST00000544093 WNT7BP56706 349 aa25.07■■□□□ 1.6
CHFR-222ENST00000544093 DUOXA2Q1HG44 320 aa25.07■■□□□ 1.6
CHFR-222ENST00000544093 KMT5BQ4FZB7 885 aa25.07■■□□□ 1.6
CHFR-222ENST00000544093 MTSS1LQ765P7 747 aa25.07■■□□□ 1.6
CHFR-222ENST00000544093 WDR49Q8IV35 697 aa25.07■■□□□ 1.6
CHFR-222ENST00000544093 CSGALNACT2Q8N6G5 542 aa25.07■■□□□ 1.6
CHFR-222ENST00000544093 SPATA18Q8TC71 538 aa25.07■■□□□ 1.6
CHFR-222ENST00000544093 BORCS6Q96GS4 357 aa25.07■■□□□ 1.6
CHFR-222ENST00000544093 ZNF512Q96ME7 567 aaPredicted RBP25.07■■□□□ 1.6
CHFR-222ENST00000544093 INTS13Q9NVM9 706 aa25.07■■□□□ 1.6
CHFR-222ENST00000544093 MRPS23Q9Y3D9 190 aaKnown RBP25.07■■□□□ 1.6
CHFR-222ENST00000544093 NOTCH4Q99466 2003 aa25.07■■□□□ 1.6
CHFR-222ENST00000544093 ANHXE9PGG2 379 aa25.06■■□□□ 1.6
CHFR-222ENST00000544093 MICAL2O94851 1124 aa25.06■■□□□ 1.6
CHFR-222ENST00000544093 RHOP08100 348 aa25.06■■□□□ 1.6
CHFR-222ENST00000544093 NTHL1P78549 312 aa25.06■■□□□ 1.6
CHFR-222ENST00000544093 MYO1EQ12965 1108 aa25.06■■□□□ 1.6
CHFR-222ENST00000544093 FBXL6Q8N531 539 aa25.06■■□□□ 1.6
CHFR-222ENST00000544093 C2orf15Q8WU43 125 aaKnown RBP25.06■■□□□ 1.6
CHFR-222ENST00000544093 TMEM174Q8WUU8 243 aa25.06■■□□□ 1.6
CHFR-222ENST00000544093 FGF13Q92913 245 aa25.06■■□□□ 1.6
CHFR-222ENST00000544093 FNBP1Q96RU3 617 aa25.06■■□□□ 1.6
CHFR-222ENST00000544093 MTMR12Q9C0I1 747 aa25.06■■□□□ 1.6
CHFR-222ENST00000544093 HCFC1R1Q9NWW0 138 aa25.06■■□□□ 1.6
CHFR-222ENST00000544093 GDE1Q9NZC3 331 aa25.06■■□□□ 1.6
CHFR-222ENST00000544093 ZNF318Q5VUA4 2279 aa25.05■■□□□ 1.6
CHFR-222ENST00000544093 GOLGA6L4A6NEF3 574 aa25.05■■□□□ 1.6
CHFR-222ENST00000544093 RPN1P04843 607 aaKnown RBP25.05■■□□□ 1.6
CHFR-222ENST00000544093 KRT19P08727 400 aa25.05■■□□□ 1.6
CHFR-222ENST00000544093 TWF1Q12792 350 aa25.05■■□□□ 1.6
CHFR-222ENST00000544093 STK4Q13043 487 aa25.05■■□□□ 1.6
CHFR-222ENST00000544093 CYP4A22Q5TCH4 519 aa25.05■■□□□ 1.6
CHFR-222ENST00000544093 KRBA2Q6ZNG9 492 aa25.05■■□□□ 1.6
CHFR-222ENST00000544093 TMEM86AQ8N2M4 240 aa25.05■■□□□ 1.6
CHFR-222ENST00000544093 GDAP2Q9NXN4 497 aa25.05■■□□□ 1.6
CHFR-222ENST00000544093 CLIC2O15247 247 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 HUS1O60921 280 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 ZNF202O95125 648 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 OR4Q2P0C623 313 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 ALDH1A3P47895 512 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 CYP2J2P51589 502 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 EPHB3P54753 998 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 HTR4Q13639 388 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 PSMD6Q15008 389 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 CENPPQ6IPU0 288 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 KIAA0895Q8NCT3 520 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 CXorf38Q8TB03 319 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 ITFG1Q8TB96 612 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 PGLYRP2Q96PD5 576 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 CORO1BQ9BR76 489 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms