RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 MYL7Q01449 175 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 DSC1Q08554 894 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 KCNA1Q09470 495 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 KCNMA1Q12791 1236 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 SMC1AQ14683 1233 aaKnown RBP12.35□□□□□ -0.43
COPS7A-217ENST00000543537 BMS1Q14692 1282 aaKnown RBP12.35□□□□□ -0.43
COPS7A-217ENST00000543537 CBX2Q14781 532 aaPredicted RBP12.35□□□□□ -0.43
COPS7A-217ENST00000543537 PLPP4Q5VZY2 271 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 TMC7Q7Z402 723 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 TMEM173Q86WV6 379 aaPredicted RBP12.35□□□□□ -0.43
COPS7A-217ENST00000543537 RNF10Q8N5U6 811 aaKnown RBP12.35□□□□□ -0.43
COPS7A-217ENST00000543537 URGCPQ8TCY9 931 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 TAF4BQ92750 862 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 EEF2KMTQ96G04 330 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 LSM14BQ9BX40 385 aaKnown RBP12.35□□□□□ -0.43
COPS7A-217ENST00000543537 S1PR5Q9H228 398 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 FZD8Q9H461 694 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 C11orf16Q9NQ32 467 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 GPRC5CQ9NQ84 441 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 ENTPD7Q9NQZ7 604 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 GCNT4Q9P109 453 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 AGO2Q9UKV8 859 aaKnown RBP12.35□□□□□ -0.43
COPS7A-217ENST00000543537 INTUQ9ULD6 942 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 GIT1Q9Y2X7 761 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 IPPQ9Y573 584 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 C5orf42Q9H799 3197 aa12.35□□□□□ -0.43
COPS7A-217ENST00000543537 LOC730098B7Z3J9 87 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 INO80B-WBP1J3KQ70 363 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 PER2O15055 1255 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 B4GALT3O60512 393 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 DDHD2O94830 711 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 CSPG5O95196 566 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 EFEMP2O95967 443 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 SRGAP2BP0DMP2 458 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 SLC11A1P49279 550 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 CASP4P49662 377 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 MXI1P50539 228 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 AFF1P51825 1210 aaKnown RBP12.34□□□□□ -0.43
COPS7A-217ENST00000543537 MFAP3P55082 362 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 BPIFB4P59827 614 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 POLR2FP61218 127 aaKnown RBP12.34□□□□□ -0.43
COPS7A-217ENST00000543537 PSMD6Q15008 389 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 ASIC2Q16515 512 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 TRIM65Q6PJ69 517 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 KIAA1328Q86T90 577 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 ZNF280BQ86YH2 543 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 CD302Q8IX05 232 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 REXO1L1PQ8IX06 675 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 PARD3BQ8TEW8 1205 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 BAP1Q92560 729 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 EIF2AQ9BY44 585 aaKnown RBP12.34□□□□□ -0.43
COPS7A-217ENST00000543537 APEX2Q9UBZ4 518 aa12.34□□□□□ -0.43
COPS7A-217ENST00000543537 BARX2Q9UMQ3 279 aaPredicted RBP12.34□□□□□ -0.43
COPS7A-217ENST00000543537 USP15Q9Y4E8 981 aaPredicted RBP12.34□□□□□ -0.43
COPS7A-217ENST00000543537 A0A0B4J269 797 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 NT5C1B-RDH14C9J2C7 533 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 DCXO43602 365 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 LILRB3O75022 631 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 ALDH2P05091 517 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 ITGA4P13612 1032 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 CASQ1P31415 396 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 SSTR3P32745 418 aaPredicted RBP12.33□□□□□ -0.44
COPS7A-217ENST00000543537 RNASELQ05823 741 aaKnown RBP12.33□□□□□ -0.44
COPS7A-217ENST00000543537 CYP24A1Q07973 514 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 KLHL30Q0D2K2 578 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 CLUL1Q15846 466 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 WDR44Q5JSH3 913 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 TMEM31Q5JXX7 168 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 ANKRD54Q6NXT1 300 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 SLC27A1Q6PCB7 646 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 SYCE2Q6PIF2 218 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 WDR59Q6PJI9 974 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 NT5DC4Q86YG4 428 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 COLGALT2Q8IYK4 626 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 GPR65Q8IYL9 337 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 RNF168Q8IYW5 571 aaPredicted RBP12.33□□□□□ -0.44
COPS7A-217ENST00000543537 VPS52Q8N1B4 723 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 GSTCDQ8NEC7 633 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 FBXL13Q8NEE6 735 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 BCL7CQ8WUZ0 217 aaPredicted RBP12.33□□□□□ -0.44
COPS7A-217ENST00000543537 CASP10Q92851 521 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 C16orf45Q96MC5 204 aaPredicted RBP12.33□□□□□ -0.44
COPS7A-217ENST00000543537 CBWD1Q9BRT8 395 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 LRFN3Q9BTN0 628 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 PHF7Q9BWX1 381 aaPredicted RBP12.33□□□□□ -0.44
COPS7A-217ENST00000543537 VN1R3Q9BXE9 311 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 CCDC113Q9H0I3 377 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 TRMT1Q9NXH9 659 aaKnown RBP12.33□□□□□ -0.44
COPS7A-217ENST00000543537 DNAJB4Q9UDY4 337 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 INPP5FQ9Y2H2 1132 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 HCFC2Q9Y5Z7 792 aa12.33□□□□□ -0.44
COPS7A-217ENST00000543537 ARL5CA6NH57 179 aa12.32□□□□□ -0.44
COPS7A-217ENST00000543537 SOWAHDA6NJG2 315 aa12.32□□□□□ -0.44
COPS7A-217ENST00000543537 LRRC53A6NM62 1247 aa12.32□□□□□ -0.44
COPS7A-217ENST00000543537 BTNL10A8MVZ5 291 aa12.32□□□□□ -0.44
COPS7A-217ENST00000543537 OGTO15294 1046 aa12.32□□□□□ -0.44
COPS7A-217ENST00000543537 CLASP2O75122 1294 aaKnown RBP12.32□□□□□ -0.44
COPS7A-217ENST00000543537 NOL4O94818 638 aa12.32□□□□□ -0.44
COPS7A-217ENST00000543537 IL18RAPO95256 599 aa12.32□□□□□ -0.44
COPS7A-217ENST00000543537 C1RP00736 705 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms