RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PAAF1Q9BRP4 392 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 SDCBP2Q9H190 292 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 FAM124BQ9H5Z6 455 aaPredicted RBP11.42□□□□□ -0.58
DDB1-221ENST00000543162 ARHGAP20Q9P2F6 1191 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 NR2E3Q9Y5X4 410 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 FNDC1Q4ZHG4 1894 aaPredicted RBP11.41□□□□□ -0.58
DDB1-221ENST00000543162 SOWAHDA6NJG2 315 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 CYB561D2O14569 222 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 B4GALT3O60512 393 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 CLCN1P35523 988 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 EIF4A3P38919 411 aaKnown RBP11.41□□□□□ -0.58
DDB1-221ENST00000543162 OR1G1P47890 313 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 BPIFB4P59827 614 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 PTK2Q05397 1052 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 HGSNATQ68CP4 663 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 DSTYKQ6XUX3 929 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 RBBP8NLQ8NC74 664 aaPredicted RBP11.41□□□□□ -0.58
DDB1-221ENST00000543162 C3orf58Q8NDZ4 430 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 APPL2Q8NEU8 664 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 CCDC42Q96M95 316 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.41□□□□□ -0.581e-6■■■□□ 15.6
DDB1-221ENST00000543162 DEF6Q9H4E7 631 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 HAUS4Q9H6D7 363 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 NRDE2Q9H7Z3 1164 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 NHEJ1Q9H9Q4 299 aaPredicted RBP11.41□□□□□ -0.58
DDB1-221ENST00000543162 DNAJB4Q9UDY4 337 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 CNTN6Q9UQ52 1028 aa11.41□□□□□ -0.58
DDB1-221ENST00000543162 SSU72P8A0A1W2PR75 194 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 CILPO75339 1184 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 KIF4AO95239 1232 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 ALDH2P05091 517 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 PLEKP08567 350 aaPredicted RBP11.4□□□□□ -0.58
DDB1-221ENST00000543162 IGFBP6P24592 240 aaPredicted RBP11.4□□□□□ -0.58
DDB1-221ENST00000543162 CYLC1P35663 651 aaPredicted RBP11.4□□□□□ -0.58
DDB1-221ENST00000543162 AARSP49588 968 aaKnown RBP eCLIP11.4□□□□□ -0.58
DDB1-221ENST00000543162 PDE6CP51160 858 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 INCA1Q0VD86 236 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 MAPK8IP2Q13387 824 aaPredicted RBP11.4□□□□□ -0.58
DDB1-221ENST00000543162 SOWAHAQ2M3V2 549 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 TIGD5Q53EQ6 642 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 ZNF394Q53GI3 561 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 RAD9BQ6WBX8 426 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 DPH6Q7L8W6 267 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 TMCO2Q7Z6W1 182 aaPredicted RBP11.4□□□□□ -0.58
DDB1-221ENST00000543162 SLC47A2Q86VL8 602 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 VPS36Q86VN1 386 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 CCDC170Q8IYT3 715 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 TOP6BLQ8N6T0 577 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 HASPINQ8TF76 798 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 HERVK_113Q902F9 699 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 SENP8Q96LD8 212 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 YME1L1Q96TA2 773 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 MRPL45Q9BRJ2 306 aaKnown RBP11.4□□□□□ -0.58
DDB1-221ENST00000543162 TMEM175Q9BSA9 504 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 COLEC11Q9BWP8 271 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 MTIF3Q9H2K0 278 aaKnown RBP11.4□□□□□ -0.58
DDB1-221ENST00000543162 SNX25Q9H3E2 840 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 BARX2Q9UMQ3 279 aaPredicted RBP11.4□□□□□ -0.58
DDB1-221ENST00000543162 L1RE1Q9UN81 338 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 FAN1Q9Y2M0 1017 aa11.4□□□□□ -0.58
DDB1-221ENST00000543162 PRG3Q9Y2Y8 225 aaPredicted RBP11.4□□□□□ -0.58
DDB1-221ENST00000543162 ARHGEF37A1IGU5 675 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 TMEM189-UBE2V1I3L0A0 370 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 NRP1O14786 923 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 TRAPPC3O43617 180 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 AKR1B10O60218 316 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 TACC1O75410 805 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 TADA2AO75478 443 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 FAM163BP0C2L3 166 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 ODC1P11926 461 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 CYP11B1P15538 503 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 ANXA13P27216 316 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 SLC11A1P49279 550 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 KIF11P52732 1056 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 ZNF132P52740 706 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 NDST1P52848 882 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 BTG3Q14201 252 aaPredicted RBP11.39□□□□□ -0.59
DDB1-221ENST00000543162 MTF1Q14872 753 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 SPOUT1Q5T280 376 aaKnown RBP11.39□□□□□ -0.59
DDB1-221ENST00000543162 CD300LGQ6UXG3 332 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 ZNF571Q7Z3V5 609 aaPredicted RBP11.39□□□□□ -0.59
DDB1-221ENST00000543162 LIMS2Q7Z4I7 341 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 NOP9Q86U38 636 aaKnown RBP11.39□□□□□ -0.59
DDB1-221ENST00000543162 CMTR2Q8IYT2 770 aaKnown RBP11.39□□□□□ -0.59
DDB1-221ENST00000543162 ADGRF2Q8IZF7 708 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 PDCL2Q8N4E4 241 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 OR6B3Q8NGW1 331 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 EPS8L1Q8TE68 723 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 ZNF689Q96CS4 500 aaPredicted RBP11.39□□□□□ -0.59
DDB1-221ENST00000543162 AGPAT1Q99943 283 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 ZBED2Q9BTP6 218 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.39□□□□□ -0.59
DDB1-221ENST00000543162 NT5C1AQ9BXI3 368 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 DNAI2Q9GZS0 605 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 ACP6Q9NPH0 428 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 CXXC1Q9P0U4 656 aaPredicted RBP11.39□□□□□ -0.59
DDB1-221ENST00000543162 HCSTQ9UBK5 93 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 PUF60Q9UHX1 559 aaKnown RBP11.39□□□□□ -0.59
DDB1-221ENST00000543162 NOCTQ9UK39 431 aaKnown RBP11.39□□□□□ -0.59
DDB1-221ENST00000543162 PYCARDQ9ULZ3 195 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms