RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 SOD2P04179 222 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 TPM3P06753 285 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 P4HA1P13674 534 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 UCHL3P15374 230 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 POU3F3P20264 500 aaPredicted RBP6.29□□□□□ -1.4
ABCF1-207ENST00000542772 ACO1P21399 889 aaKnown RBP6.29□□□□□ -1.4
ABCF1-207ENST00000542772 IBSPP21815 317 aaPredicted RBP6.29□□□□□ -1.4
ABCF1-207ENST00000542772 RFX1P22670 979 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 WARSP23381 471 aaKnown RBP6.29□□□□□ -1.4
ABCF1-207ENST00000542772 TBXAS1P24557 533 aaPredicted RBP6.29□□□□□ -1.4
ABCF1-207ENST00000542772 DNAJB2P25686 324 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 PIK3CAP42336 1068 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 ASPAP45381 313 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 LHX1P48742 406 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 MRE11P49959 708 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 ZNF75DP51815 510 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 MFAP3P55082 362 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 NOP14P78316 857 aaKnown RBP6.29□□□□□ -1.4
ABCF1-207ENST00000542772 DSG1Q02413 1049 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 INCA1Q0VD86 236 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 TBX2Q13207 712 aaPredicted RBP6.29□□□□□ -1.4
ABCF1-207ENST00000542772 CUL2Q13617 745 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 CAMK1Q14012 370 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 USP41Q3LFD5 358 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 SPOUT1Q5T280 376 aaKnown RBP6.29□□□□□ -1.4
ABCF1-207ENST00000542772 SPOPLQ6IQ16 392 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 PDE12Q6L8Q7 609 aaKnown RBP6.29□□□□□ -1.4
ABCF1-207ENST00000542772 GPR153Q6NV75 609 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 DSTYKQ6XUX3 929 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.29□□□□□ -1.4
ABCF1-207ENST00000542772 UNC93AQ86WB7 457 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 VSTM4Q8IW00 320 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 ARHGEF19Q8IW93 802 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 TMEM86AQ8N2M4 240 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 CCDC150Q8NCX0 1101 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 APPL2Q8NEU8 664 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 LNX1Q8TBB1 728 aaPredicted RBP6.29□□□□□ -1.4
ABCF1-207ENST00000542772 WHAMMQ8TF30 809 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 KBTBD7Q8WVZ9 684 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 IQCDQ96DY2 449 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 KREMEN1Q96MU8 473 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 NT5C1BQ96P26 610 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 ACBD6Q9BR61 282 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 C17orf80Q9BSJ5 609 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 STK33Q9BYT3 514 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 IMPG2Q9BZV3 1241 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 TRIM5Q9C035 493 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 INTS2Q9H0H0 1204 aaKnown RBP6.29□□□□□ -1.4
ABCF1-207ENST00000542772 LMAN2LQ9H0V9 348 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 SDCBP2Q9H190 292 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 GANQ9H2C0 597 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 SLC28A3Q9HAS3 691 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 RXFP1Q9HBX9 757 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 UBE2TQ9NPD8 197 aaPredicted RBP6.29□□□□□ -1.4
ABCF1-207ENST00000542772 LMCD1Q9NZU5 365 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 GCNT4Q9P109 453 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 PUF60Q9UHX1 559 aaKnown RBP6.29□□□□□ -1.4
ABCF1-207ENST00000542772 DNAJC12Q9UKB3 198 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 DSEQ9UL01 958 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 KIAA1257Q9ULG3 409 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 MYO6Q9UM54 1294 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 CAPN11Q9UMQ6 739 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 L1RE1Q9UN81 338 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 SSX2IPQ9Y2D8 614 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 NME7Q9Y5B8 376 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 SNX9Q9Y5X1 595 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 BACE2Q9Y5Z0 518 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 VWA8A3KMH1 1905 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 PLXNA4Q9HCM2 1894 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 A0A1W2PQJ5 194 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 FOXN3O00409 490 aaPredicted RBP6.28□□□□□ -1.4
ABCF1-207ENST00000542772 FSCN2O14926 492 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 EPHB6O15197 1021 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 LPXNO60711 386 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 CILPO75339 1184 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 WEE2P0C1S8 567 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 CTSAP10619 480 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 DNAJB1P25685 340 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 LMO2P25791 158 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 TKTP29401 623 aaKnown RBP6.28□□□□□ -1.4
ABCF1-207ENST00000542772 CDC25BP30305 580 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 HNRNPH3P31942 346 aaKnown RBP6.28□□□□□ -1.4
ABCF1-207ENST00000542772 GNL1P36915 607 aaPredicted RBP6.28□□□□□ -1.4
ABCF1-207ENST00000542772 PBX3P40426 434 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 KLK7P49862 253 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 CDH8P55286 799 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 JAM2P57087 298 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 ERVFC1P60507 584 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 APBA1Q02410 837 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 LRMPQ12912 555 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 ZNF699Q32M78 642 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 FAM171A1Q5VUB5 890 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 WSCD1Q658N2 575 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 SPECC1LQ69YQ0 1117 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 SLC8B1Q6J4K2 584 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 FAM171BQ6P995 826 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 PDXDC1Q6P996 788 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 ANKS3Q6ZW76 656 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 RRAGAQ7L523 313 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 IRF2BP2Q7Z5L9 587 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms