RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 DNHD1Q96M86 4753 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 FLNCQ14315 2725 aa3.65□□□□□ -1.82
CHD4-209ENST00000542717 TLN1Q9Y490 2541 aaKnown RBP3.65□□□□□ -1.83
CHD4-209ENST00000542717 ESYT2A0FGR8 921 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 ZBTB42B2RXF5 422 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 KLRF2D3W0D1 207 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 IPO5O00410 1097 aaKnown RBP3.65□□□□□ -1.83
CHD4-209ENST00000542717 RNF113AO15541 343 aaKnown RBP3.65□□□□□ -1.83
CHD4-209ENST00000542717 GJB6O95452 261 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 KLF8O95600 359 aaPredicted RBP3.65□□□□□ -1.83
CHD4-209ENST00000542717 LDOC1O95751 146 aaPredicted RBP3.65□□□□□ -1.83
CHD4-209ENST00000542717 MPOP05164 745 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 ARSAP15289 507 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 ATF2P15336 505 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 ATP5JP18859 108 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 GJA4P35212 333 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 TIE1P35590 1138 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 SREBF1P36956 1147 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 CASRP41180 1078 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 DNM2P50570 870 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 CCT8P50990 548 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 GABREP78334 506 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 ROR1Q01973 937 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 SCRN1Q12765 414 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 BFSP1Q12934 665 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 GRIK3Q13003 919 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 DNAJC3Q13217 504 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 HSP90AB4PQ58FF6 505 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 EOGTQ5NDL2 527 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 C1QL3Q5VWW1 255 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 DBX2Q6ZNG2 339 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 MAMDC2Q7Z304 686 aaPredicted RBP3.65□□□□□ -1.83
CHD4-209ENST00000542717 MRPL10Q7Z7H8 261 aaKnown RBP3.65□□□□□ -1.83
CHD4-209ENST00000542717 RHPN2Q8IUC4 686 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 CCDC60Q8IWA6 550 aaPredicted RBP3.65□□□□□ -1.83
CHD4-209ENST00000542717 CPA6Q8N4T0 437 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 ALLCQ8N6M5 410 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 ZNF461Q8TAF7 563 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 ZNF564Q8TBZ8 553 aaPredicted RBP3.65□□□□□ -1.83
CHD4-209ENST00000542717 RHPN1Q8TCX5 695 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 PIBF1Q8WXW3 757 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 EZH1Q92800 747 aaPredicted RBP3.65□□□□□ -1.83
CHD4-209ENST00000542717 FOXJ1Q92949 421 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 CNDP2Q96KP4 475 aaKnown RBP3.65□□□□□ -1.83
CHD4-209ENST00000542717 NLRP4Q96MN2 994 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 PIGSQ96S52 555 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 MMS19Q96T76 1030 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 SEMA3CQ99985 751 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 POLR3CQ9BUI4 534 aaPredicted RBP3.65□□□□□ -1.83
CHD4-209ENST00000542717 SMG9Q9H0W8 520 aaKnown RBP3.65□□□□□ -1.83
CHD4-209ENST00000542717 HPS4Q9NQG7 708 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 KCNH7Q9NS40 1196 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 AGPAT5Q9NUQ2 364 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 OBP2AQ9NY56 170 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 CEP72Q9P209 647 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 MTRRQ9UBK8 725 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 PARP2Q9UGN5 583 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 CYP8B1Q9UNU6 501 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 IPPQ9Y573 584 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 CEP192Q8TEP8 1941 aa3.65□□□□□ -1.83
CHD4-209ENST00000542717 UTP20O75691 2785 aaKnown RBP3.64□□□□□ -1.83
CHD4-209ENST00000542717 MYLKQ15746 1914 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 A0A1B0GVT2 93 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 OTOL1A6NHN0 477 aaPredicted RBP3.64□□□□□ -1.83
CHD4-209ENST00000542717 SPDYE3A6NKU9 549 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 KCNK3O14649 394 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 TRIM66O15016 1216 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 BCAT2O15382 392 aaPredicted RBP3.64□□□□□ -1.83
CHD4-209ENST00000542717 VPS4BO75351 444 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 ZNF217O75362 1048 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 KIF4AO95239 1232 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 ATG7O95352 703 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 PRAMEF12O95522 483 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 ZFYP08048 801 aaPredicted RBP3.64□□□□□ -1.83
CHD4-209ENST00000542717 C1SP09871 688 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 DRD2P14416 443 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 HNRNPLP14866 589 aaKnown RBP eCLIP3.64□□□□□ -1.83
CHD4-209ENST00000542717 GABRR2P28476 465 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 RBMS1P29558 406 aaKnown RBP3.64□□□□□ -1.83
CHD4-209ENST00000542717 IFNAR2P48551 515 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 EPHA5P54756 1037 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 ERVPABLB-1P60509 514 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 MRPS21P82921 87 aaKnown RBP3.64□□□□□ -1.83
CHD4-209ENST00000542717 IL9RQ01113 521 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 NCBP1Q09161 790 aaKnown RBP3.64□□□□□ -1.83
CHD4-209ENST00000542717 NR1H3Q13133 447 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 DDX10Q13206 875 aaKnown RBP3.64□□□□□ -1.83
CHD4-209ENST00000542717 TUSC3Q13454 348 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 EML3Q32P44 896 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 ARL13BQ3SXY8 428 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 DCAF6Q58WW2 860 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 PPP1R26Q5T8A7 1209 aaPredicted RBP3.64□□□□□ -1.83
CHD4-209ENST00000542717 FBXL19Q6PCT2 694 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 MFSD6Q6ZSS7 791 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 ANKS3Q6ZW76 656 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 ZNF410Q86VK4 478 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 IQCA1Q86XH1 822 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 DGKHQ86XP1 1220 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 TCEAL8Q8IYN2 117 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 STAG2Q8N3U4 1231 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms